RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-204	ENST00000577393	GRIPAP1	Q4V328	841 aa		33.71	■■■□□ 2.99
PPP4R1-204	ENST00000577393	TMX4	Q9H1E5	349 aa	Predicted RBP	33.7	■■■□□ 2.99
PPP4R1-204	ENST00000577393	TAF1	P21675	1872 aa		33.68	■■■□□ 2.98
PPP4R1-204	ENST00000577393	SP8	Q8IXZ3	490 aa		33.68	■■■□□ 2.98
PPP4R1-204	ENST00000577393	PDE8A	O60658	829 aa		33.67	■■■□□ 2.98
PPP4R1-204	ENST00000577393	IARS	P41252	1262 aa	Known RBP	33.67	■■■□□ 2.98
PPP4R1-204	ENST00000577393	RRAGC	Q9HB90	399 aa		33.67	■■■□□ 2.98
PPP4R1-204	ENST00000577393	CDHR2	Q9BYE9	1310 aa		33.67	■■■□□ 2.98
PPP4R1-204	ENST00000577393	DPY19L2	Q6NUT2	758 aa		33.66	■■■□□ 2.98
PPP4R1-204	ENST00000577393	TRMT2A	Q8IZ69	625 aa	Known RBP	33.66	■■■□□ 2.98
PPP4R1-204	ENST00000577393		F6X3S4	739 aa		33.65	■■■□□ 2.98
PPP4R1-204	ENST00000577393	LINS1	Q8NG48	757 aa		33.65	■■■□□ 2.98
PPP4R1-204	ENST00000577393	CELF1	Q92879	486 aa	Known RBP	33.65	■■■□□ 2.98
PPP4R1-204	ENST00000577393	GCKR	Q14397	625 aa		33.64	■■■□□ 2.98
PPP4R1-204	ENST00000577393		H7C1W4	665 aa		33.63	■■■□□ 2.97
PPP4R1-204	ENST00000577393	TMC4	Q7Z404	712 aa		33.63	■■■□□ 2.97
PPP4R1-204	ENST00000577393	CCDC152	Q4G0S7	254 aa		33.62	■■■□□ 2.97
PPP4R1-204	ENST00000577393	UBE3B	Q7Z3V4	1068 aa		33.61	■■■□□ 2.97
PPP4R1-204	ENST00000577393	SEC31B	Q9NQW1	1179 aa		33.61	■■■□□ 2.97
PPP4R1-204	ENST00000577393	MPND	Q8N594	471 aa		33.6	■■■□□ 2.97
PPP4R1-204	ENST00000577393	MRPL50	Q8N5N7	158 aa	Known RBP	33.6	■■■□□ 2.97
PPP4R1-204	ENST00000577393	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.6	■■■□□ 2.97
PPP4R1-204	ENST00000577393	COL4A1	P02462	1669 aa		33.59	■■■□□ 2.97
PPP4R1-204	ENST00000577393	RPS8	P62241	208 aa	Known RBP	33.59	■■■□□ 2.97
PPP4R1-204	ENST00000577393	BEND3	Q5T5X7	828 aa		33.59	■■■□□ 2.97
PPP4R1-204	ENST00000577393	DPP8	Q6V1X1	898 aa	Predicted RBP	33.59	■■■□□ 2.97
PPP4R1-204	ENST00000577393	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.59	■■■□□ 2.97
PPP4R1-204	ENST00000577393	TOMM70	O94826	608 aa		33.58	■■■□□ 2.97
PPP4R1-204	ENST00000577393	DDN	O94850	711 aa	Predicted RBP	33.58	■■■□□ 2.97
PPP4R1-204	ENST00000577393	CTSW	P56202	376 aa		33.58	■■■□□ 2.97
PPP4R1-204	ENST00000577393	JDP2	Q8WYK2	163 aa		33.58	■■■□□ 2.97
PPP4R1-204	ENST00000577393	SSH1	Q8WYL5	1049 aa		33.58	■■■□□ 2.97
PPP4R1-204	ENST00000577393	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.57	■■■□□ 2.96
PPP4R1-204	ENST00000577393	LARGE2	Q8N3Y3	721 aa		33.57	■■■□□ 2.96
PPP4R1-204	ENST00000577393	SUPT20H	Q8NEM7	779 aa		33.57	■■■□□ 2.96
PPP4R1-204	ENST00000577393	FZD9	O00144	591 aa		33.56	■■■□□ 2.96
PPP4R1-204	ENST00000577393	VEGFA	P15692	232 aa	Predicted RBP	33.56	■■■□□ 2.96
PPP4R1-204	ENST00000577393	CASP7	P55210	303 aa		33.56	■■■□□ 2.96
PPP4R1-204	ENST00000577393	ZNF541	Q9H0D2	1346 aa		33.55	■■■□□ 2.96
PPP4R1-204	ENST00000577393	COL4A5	P29400	1685 aa		33.55	■■■□□ 2.96
PPP4R1-204	ENST00000577393	POTEC	B2RU33	542 aa		33.55	■■■□□ 2.96
PPP4R1-204	ENST00000577393	PPIP5K2	O43314	1243 aa		33.55	■■■□□ 2.96
PPP4R1-204	ENST00000577393	TTLL11	Q8NHH1	800 aa		33.55	■■■□□ 2.96
PPP4R1-204	ENST00000577393	VPS33B	Q9H267	617 aa		33.54	■■■□□ 2.96
PPP4R1-204	ENST00000577393	LRRC37A	A6NMS7	1700 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	WDR90	Q96KV7	1748 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	AOC3	Q16853	763 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	SLC4A10	Q6U841	1118 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	PLA2G12B	Q9BX93	195 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	BCL2L13	Q9BXK5	485 aa		33.53	■■■□□ 2.96
PPP4R1-204	ENST00000577393	ALDH1L2	Q3SY69	923 aa		33.52	■■■□□ 2.96
PPP4R1-204	ENST00000577393	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.52	■■■□□ 2.96
PPP4R1-204	ENST00000577393	RBM46	Q8TBY0	533 aa	Known RBP	33.51	■■■□□ 2.95
PPP4R1-204	ENST00000577393	GREM2	Q9H772	168 aa		33.51	■■■□□ 2.95
PPP4R1-204	ENST00000577393	MYH3	P11055	1940 aa		33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	CT47B1	P0C2W7	299 aa	Predicted RBP	33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	GPSM2	P81274	684 aa		33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	ANKRD18A	Q8IVF6	992 aa		33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	NIM1K	Q8IY84	436 aa		33.5	■■■□□ 2.95
PPP4R1-204	ENST00000577393	SRCIN1	Q9C0H9	1055 aa		33.49	■■■□□ 2.95
PPP4R1-204	ENST00000577393	PTPRC	P08575	1304 aa		33.49	■■■□□ 2.95
PPP4R1-204	ENST00000577393	ALDH1L1	O75891	902 aa		33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	EIF6	P56537	245 aa	Known RBP	33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	KIAA2012	Q0VF49	1180 aa		33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	CDC5L	Q99459	802 aa	Known RBP	33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	SMC4	Q9NTJ3	1288 aa		33.48	■■■□□ 2.95
PPP4R1-204	ENST00000577393	RTL9	Q8NET4	1388 aa		33.47	■■■□□ 2.95
PPP4R1-204	ENST00000577393	DUOX1	Q9NRD9	1551 aa		33.47	■■■□□ 2.95
PPP4R1-204	ENST00000577393	POLL	Q9UGP5	575 aa		33.46	■■■□□ 2.95
PPP4R1-204	ENST00000577393	GRM8	O00222	908 aa		33.45	■■■□□ 2.95
PPP4R1-204	ENST00000577393	CSF1R	P07333	972 aa		33.45	■■■□□ 2.95
PPP4R1-204	ENST00000577393	GPC2	Q8N158	579 aa		33.45	■■■□□ 2.95
PPP4R1-204	ENST00000577393	C6orf229	H3BNL8	230 aa		33.44	■■■□□ 2.94
PPP4R1-204	ENST00000577393	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.44	■■■□□ 2.94
PPP4R1-204	ENST00000577393	TBC1D16	Q8TBP0	767 aa		33.43	■■■□□ 2.94
PPP4R1-204	ENST00000577393	PODXL2	Q9NZ53	605 aa		33.43	■■■□□ 2.94
PPP4R1-204	ENST00000577393	ZNRF3	Q9ULT6	936 aa		33.43	■■■□□ 2.94
PPP4R1-204	ENST00000577393	GJA3	Q9Y6H8	435 aa		33.43	■■■□□ 2.94
PPP4R1-204	ENST00000577393	IQCA1L	A6NCM1	817 aa		33.42	■■■□□ 2.94
PPP4R1-204	ENST00000577393	FOXO4	P98177	505 aa		33.42	■■■□□ 2.94
PPP4R1-204	ENST00000577393	WASHC4	Q2M389	1173 aa		33.42	■■■□□ 2.94
PPP4R1-204	ENST00000577393	FAM161A	Q3B820	660 aa		33.42	■■■□□ 2.94
PPP4R1-204	ENST00000577393	ANKIB1	Q9P2G1	1089 aa		33.42	■■■□□ 2.94
PPP4R1-204	ENST00000577393	ITGA6	P23229	1130 aa		33.41	■■■□□ 2.94
PPP4R1-204	ENST00000577393	BSDC1	Q9NW68	430 aa	Predicted RBP	33.41	■■■□□ 2.94
PPP4R1-204	ENST00000577393	LTBP1	Q14766	1721 aa		33.4	■■■□□ 2.94
PPP4R1-204	ENST00000577393	HSPA6	P17066	643 aa		33.4	■■■□□ 2.94
PPP4R1-204	ENST00000577393	FSTL1	Q12841	308 aa		33.4	■■■□□ 2.94
PPP4R1-204	ENST00000577393	RIMBP2	O15034	1052 aa		33.39	■■■□□ 2.94
PPP4R1-204	ENST00000577393	SMC1B	Q8NDV3	1235 aa		33.39	■■■□□ 2.94
PPP4R1-204	ENST00000577393	GPR101	Q96P66	508 aa	Predicted RBP	33.39	■■■□□ 2.94
PPP4R1-204	ENST00000577393	EYA3	Q99504	573 aa		33.39	■■■□□ 2.94
PPP4R1-204	ENST00000577393	GGA1	Q9UJY5	639 aa		33.39	■■■□□ 2.94
PPP4R1-204	ENST00000577393	UFL1	O94874	794 aa		33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	IGHMBP2	P38935	993 aa	Known RBP	33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	RARS	P54136	660 aa	Known RBP	33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	CXCL9	Q07325	125 aa		33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	EPHA10	Q5JZY3	1008 aa		33.38	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms