RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	MAP2K2	P36507	400 aa		12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	MAP1S	Q66K74	1059 aa	Predicted RBP	12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	RTKN2	Q8IZC4	609 aa		12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CAPNS2	Q96L46	248 aa		12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	GPR101	Q96P66	508 aa	Predicted RBP	12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	EPAS1	Q99814	870 aa		12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CACNA1S	Q13698	1873 aa		12.56	□□□□□ -0.4
TOM1L1-223	ENST00000576932	NPR1	P16066	1061 aa		12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	TTC5	Q8N0Z6	440 aa		12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CCDC24	Q8N4L8	307 aa		12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	TNRC18	O15417	2968 aa	Predicted RBP	12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	RNF123	Q5XPI4	1314 aa		12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	HEG1	Q9ULI3	1381 aa		12.55	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CAMTA2	O94983	1202 aa		12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	IARS	P41252	1262 aa	Known RBP	12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CLEC4G	Q6UXB4	293 aa		12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	NPM2	Q86SE8	214 aa	Known RBP	12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	TBC1D2B	Q9UPU7	963 aa		12.54	□□□□□ -0.4
TOM1L1-223	ENST00000576932	BCOR	Q6W2J9	1755 aa		12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	MLLT3	P42568	568 aa	Predicted RBP	12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	MORC1	Q86VD1	984 aa		12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	PSMD1	Q99460	953 aa		12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	TLL2	Q9Y6L7	1015 aa		12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	LTBP1	Q14766	1721 aa		12.53	□□□□□ -0.4
TOM1L1-223	ENST00000576932	CYP4F22	Q6NT55	531 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ZNF790	Q6PG37	636 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	GPIHBP1	Q8IV16	184 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ZNF496	Q96IT1	587 aa	Predicted RBP	12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	HHIPL1	Q96JK4	782 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	MCOLN1	Q9GZU1	580 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TRPM7	Q96QT4	1865 aa		12.52	□□□□□ -0.41
TOM1L1-223	ENST00000576932	HOXB3	P14651	431 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	LMOD1	P29536	600 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ALDH1B1	P30837	517 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	MTHFSD	Q2M296	383 aa	Known RBP	12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	USP50	Q70EL3	339 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	JDP2	Q8WYK2	163 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	DDX12P	Q92771	950 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	FBXW7	Q969H0	707 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	OTUD5	Q96G74	571 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	SNED1	Q8TER0	1413 aa		12.51	□□□□□ -0.41
TOM1L1-223	ENST00000576932	BRPF1	P55201	1214 aa	Predicted RBP	12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	EIF6	P56537	245 aa	Known RBP	12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	GRIPAP1	Q4V328	841 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	CST9	Q5W186	159 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	CC2D2B	Q6DHV5	1058 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	DZIP3	Q86Y13	1208 aa	Known RBP	12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	SYNE4	Q8N205	404 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	PANK3	Q9H999	370 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ZNF652	Q9Y2D9	606 aa		12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.5	□□□□□ -0.41
TOM1L1-223	ENST00000576932	ARSI	Q5FYB1	569 aa		12.49	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TPTE2	Q6XPS3	522 aa		12.49	□□□□□ -0.41
TOM1L1-223	ENST00000576932	SAPCD2	Q86UD0	394 aa		12.49	□□□□□ -0.41
TOM1L1-223	ENST00000576932	FMNL2	Q96PY5	1086 aa		12.49	□□□□□ -0.41
TOM1L1-223	ENST00000576932	SCNN1D	P51172	638 aa		12.48	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TEF	Q10587	303 aa		12.48	□□□□□ -0.41
TOM1L1-223	ENST00000576932	SIPA1L3	O60292	1781 aa	Predicted RBP	12.48	□□□□□ -0.41
TOM1L1-223	ENST00000576932	A1BG	P04217	495 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	HMOX1	P09601	288 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TYW1B	Q6NUM6	668 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TSKS	Q9UJT2	592 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	TIMELESS	Q9UNS1	1208 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	CASP8AP2	Q9UKL3	1982 aa		12.47	□□□□□ -0.41
TOM1L1-223	ENST00000576932	AOC2	O75106	756 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	NUDT7	P0C024	238 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	EPS15	P42566	896 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	GRM1	Q13255	1194 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	DGKZ	Q13574	1117 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	CRY2	Q49AN0	593 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	OLFM4	Q6UX06	510 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	POLR3GL	Q9BT43	218 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	GJA3	Q9Y6H8	435 aa		12.46	□□□□□ -0.41
TOM1L1-223	ENST00000576932	GNAT3	A8MTJ3	354 aa		12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	TRAF5	O00463	557 aa		12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	FMR1	Q06787	632 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	PRPF38B	Q5VTL8	546 aa	Known RBP	12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	GPR153	Q6NV75	609 aa		12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	IL17RE	Q8NFR9	667 aa		12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	GAS2L2	Q8NHY3	880 aa		12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	ADARB2	Q9NS39	739 aa	Known RBP	12.45	□□□□□ -0.42
TOM1L1-223	ENST00000576932	CEMIP	Q8WUJ3	1361 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	HOXB1	P14653	301 aa	Predicted RBP	12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	NOG	Q13253	232 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	PPP4R3B	Q5MIZ7	849 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	RBM26	Q5T8P6	1007 aa	Known RBP	12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	VPS33B	Q9H267	617 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	PGAP2	Q9UHJ9	254 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	KNSTRN	Q9Y448	316 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	COL4A5	P29400	1685 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	RIC1	Q4ADV7	1423 aa		12.44	□□□□□ -0.42
TOM1L1-223	ENST00000576932	CELF2	O95319	508 aa	Known RBP	12.43	□□□□□ -0.42
TOM1L1-223	ENST00000576932	LARGE2	Q8N3Y3	721 aa		12.43	□□□□□ -0.42
TOM1L1-223	ENST00000576932	ZC3H15	Q8WU90	426 aa	Known RBP	12.43	□□□□□ -0.42
TOM1L1-223	ENST00000576932	GPRC5D	Q9NZD1	345 aa		12.43	□□□□□ -0.42
TOM1L1-223	ENST00000576932	KIF7	Q2M1P5	1343 aa		12.42	□□□□□ -0.42
TOM1L1-223	ENST00000576932	CDHR2	Q9BYE9	1310 aa		12.42	□□□□□ -0.42

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