RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 SF3B3Q15393 1217 aaKnown RBP10.68□□□□□ -0.7
PRPF8-213ENST00000576407 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
PRPF8-213ENST00000576407 LMBR1LQ6UX01 489 aa10.68□□□□□ -0.7
PRPF8-213ENST00000576407 TTLL11Q8NHH1 800 aa10.68□□□□□ -0.7
PRPF8-213ENST00000576407 CCDC85AQ96PX6 553 aaPredicted RBP10.68□□□□□ -0.7
PRPF8-213ENST00000576407 MYH3P11055 1940 aa10.68□□□□□ -0.7
PRPF8-213ENST00000576407 MTX1Q13505 466 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 CRY2Q49AN0 593 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 CCDC152Q4G0S7 254 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 CHMP3Q9Y3E7 222 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 KIF13BQ9NQT8 1826 aa10.67□□□□□ -0.7
PRPF8-213ENST00000576407 SRGNP10124 158 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 RPAP2Q8IXW5 612 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-213ENST00000576407 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 GREM2Q9H772 168 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 PPP1R1BQ9UD71 204 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-213ENST00000576407 CD2APQ9Y5K6 639 aa10.66□□□□□ -0.7
PRPF8-213ENST00000576407 COL11A2P13942 1736 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-213ENST00000576407 RTL9Q8NET4 1388 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 H0YIN7 160 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 SRGAP3O43295 1099 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 ITGA6P23229 1130 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 CHRNA5P30532 468 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 IFIT5Q13325 482 aaKnown RBP10.65□□□□□ -0.7
PRPF8-213ENST00000576407 C2CD5Q86YS7 1000 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.7
PRPF8-213ENST00000576407 SEC31BQ9NQW1 1179 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 PDZRN3Q9UPQ7 1066 aa10.65□□□□□ -0.7
PRPF8-213ENST00000576407 KIAA1551Q9HCM1 1747 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 ANKRD18BA2A2Z9 1011 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 NPR1P16066 1061 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 DPEP1P16444 411 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 HOXA10P31260 410 aaPredicted RBP10.64□□□□□ -0.71
PRPF8-213ENST00000576407 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
PRPF8-213ENST00000576407 TGFB2P61812 414 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 POLA2Q14181 598 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 CCDC57Q2TAC2 916 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
PRPF8-213ENST00000576407 SSH3Q8TE77 659 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 LRP5O75197 1615 aa10.64□□□□□ -0.71
PRPF8-213ENST00000576407 COL4A1P02462 1669 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 HMMRO75330 724 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 KCNA3P22001 575 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 STYK1Q6J9G0 422 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 KLHDC4Q8TBB5 520 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
PRPF8-213ENST00000576407 ZNF622Q969S3 477 aaKnown RBP eCLIP10.63□□□□□ -0.71
PRPF8-213ENST00000576407 RBM17Q96I25 401 aaKnown RBP10.63□□□□□ -0.71
PRPF8-213ENST00000576407 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
PRPF8-213ENST00000576407 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
PRPF8-213ENST00000576407 TAF1P21675 1872 aa10.63□□□□□ -0.71
PRPF8-213ENST00000576407 ALDH1B1P30837 517 aa10.62□□□□□ -0.71
PRPF8-213ENST00000576407 RPS8P62241 208 aaKnown RBP10.62□□□□□ -0.71
PRPF8-213ENST00000576407 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
PRPF8-213ENST00000576407 GRAPQ13588 217 aa10.62□□□□□ -0.71
PRPF8-213ENST00000576407 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
PRPF8-213ENST00000576407 NLGN2Q8NFZ4 835 aa10.62□□□□□ -0.71
PRPF8-213ENST00000576407 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
PRPF8-213ENST00000576407 CDC5LQ99459 802 aaKnown RBP10.62□□□□□ -0.71
PRPF8-213ENST00000576407 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
PRPF8-213ENST00000576407 IGHMBP2P38935 993 aaKnown RBP10.61□□□□□ -0.71
PRPF8-213ENST00000576407 HDAC1Q13547 482 aaPredicted RBP10.61□□□□□ -0.71
PRPF8-213ENST00000576407 ANKRD18AQ8IVF6 992 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 SYT17Q9BSW7 474 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 SIL1Q9H173 461 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
PRPF8-213ENST00000576407 SURF6O75683 361 aaKnown RBP10.6□□□□□ -0.71
PRPF8-213ENST00000576407 BBOX1O75936 387 aa10.6□□□□□ -0.71
PRPF8-213ENST00000576407 IGHDP01880 384 aa10.6□□□□□ -0.71
PRPF8-213ENST00000576407 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
PRPF8-213ENST00000576407 LDHAL6AQ6ZMR3 332 aa10.6□□□□□ -0.71
PRPF8-213ENST00000576407 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
PRPF8-213ENST00000576407 PUS3Q9BZE2 481 aaKnown RBP10.6□□□□□ -0.71
PRPF8-213ENST00000576407 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
PRPF8-213ENST00000576407 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
PRPF8-213ENST00000576407 PIM2Q9P1W9 311 aa10.6□□□□□ -0.71
PRPF8-213ENST00000576407 EYA2O00167 538 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
PRPF8-213ENST00000576407 LRRC24Q50LG9 513 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 TTLL6Q8N841 843 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 CNNM1Q9NRU3 951 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 WWC3Q9ULE0 1092 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms