RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PAFAH1B1P43034 410 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 ZFYVE9O95405 1425 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 HAND2P61296 217 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 LEO1Q8WVC0 666 aaPredicted RBP15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 VGLL3A8MV65 326 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 CCDC175P0C221 793 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 PA2G4Q9UQ80 394 aaKnown RBP15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 RAD21O60216 631 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 CABP4P57796 275 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 PPIP5K1Q6PFW1 1433 aa15.09■□□□□ 0.01
PCDHGB3-201ENST00000576222 KLF18A0A0U1RQI7 1052 aa15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 PHACTR2O75167 634 aa15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 KANK3Q6NY19 840 aa15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 TAF4BQ92750 862 aa15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 ZNF215Q9UL58 517 aaPredicted RBP15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 SAMD9Q5K651 1589 aa15.08■□□□□ 0.01
PCDHGB3-201ENST00000576222 KIF6Q6ZMV9 814 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 CCDC85AQ96PX6 553 aaPredicted RBP15.08■□□□□ 0
PCDHGB3-201ENST00000576222 CHPF2Q9P2E5 772 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 USO1O60763 962 aaKnown RBP15.08■□□□□ 0
PCDHGB3-201ENST00000576222 SSRP1Q08945 709 aaKnown RBP15.08■□□□□ 0
PCDHGB3-201ENST00000576222 KARSQ15046 597 aaKnown RBP15.08■□□□□ 0
PCDHGB3-201ENST00000576222 TTC31Q49AM3 519 aaPredicted RBP15.08■□□□□ 0
PCDHGB3-201ENST00000576222 AKAP2Q9Y2D5 859 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 SLC12A7Q9Y666 1083 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 AOX1Q06278 1338 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 N4BP3O15049 544 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 MCMDC2Q4G0Z9 681 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 CARD6Q9BX69 1037 aa15.08■□□□□ 0
PCDHGB3-201ENST00000576222 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 ZBTB9Q96C00 473 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 PLCH2O75038 1416 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 A0A1B0GVL5 298 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 ATL3Q6DD88 541 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 KIAA1524Q8TCG1 905 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
PCDHGB3-201ENST00000576222 PLCD4Q9BRC7 762 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
PCDHGB3-201ENST00000576222 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 A0A087WZG4 1122 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 TUBB4BP68371 445 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 CTAGE9A4FU28 777 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 PPP2R3AQ06190 1150 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
PCDHGB3-201ENST00000576222 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
PCDHGB3-201ENST00000576222 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 MICU3Q86XE3 530 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 NCOA7Q8NI08 942 aa15.07■□□□□ 0
PCDHGB3-201ENST00000576222 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHGB3-201ENST00000576222 MICALL1Q8N3F8 863 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 ALDH1L1O75891 902 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
PCDHGB3-201ENST00000576222 IFIT3O14879 490 aaKnown RBP15.06■□□□□ 0
PCDHGB3-201ENST00000576222 LZTFL1Q9NQ48 299 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
PCDHGB3-201ENST00000576222 CHL1O00533 1208 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 RPS6KB1P23443 525 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 PIP4K2BP78356 416 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 AMOTQ4VCS5 1084 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 FKBP15Q5T1M5 1219 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 NBPF11Q86T75 865 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 TAX1BP1Q86VP1 789 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 PDLIM2Q96JY6 352 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 NAPBQ9H115 298 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 IMPACTQ9P2X3 320 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 RIMS2Q9UQ26 1411 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 APOBRQ0VD83 1088 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 HDXQ7Z353 690 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 ALG1Q9BT22 464 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 JADE2Q9NQC1 790 aa15.05■□□□□ 0
PCDHGB3-201ENST00000576222 NSFL1CQ9UNZ2 370 aaKnown RBP15.05■□□□□ 0
PCDHGB3-201ENST00000576222 MBD5Q9P267 1494 aa15.05■□□□□ -0
PCDHGB3-201ENST00000576222 FOXO3O43524 673 aa15.05■□□□□ -0
PCDHGB3-201ENST00000576222 MYL5Q02045 173 aa15.05■□□□□ -0
PCDHGB3-201ENST00000576222 TUBBP07437 444 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 RHOXF2BP0C7M4 288 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
PCDHGB3-201ENST00000576222 BAG1Q99933 345 aaPredicted RBP15.04■□□□□ -0
PCDHGB3-201ENST00000576222 RHOXF2Q9BQY4 288 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 SNRKQ9NRH2 765 aa15.04■□□□□ -0
PCDHGB3-201ENST00000576222 MTMR6Q9Y217 621 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms