RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, human

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-208	ENST00000575113	ISCA1	Q9BUE6	129 aa		27.96	■■■□□ 2.07
RFWD3-208	ENST00000575113	ZNRF3	Q9ULT6	936 aa		27.96	■■■□□ 2.07
RFWD3-208	ENST00000575113	ZNF853	P0CG23	659 aa		27.95	■■■□□ 2.06
RFWD3-208	ENST00000575113	TMC4	Q7Z404	712 aa		27.95	■■■□□ 2.06
RFWD3-208	ENST00000575113	ELL2	O00472	640 aa	Predicted RBP	27.94	■■■□□ 2.06
RFWD3-208	ENST00000575113	GOLGA2	Q08379	1002 aa		27.94	■■■□□ 2.06
RFWD3-208	ENST00000575113	RIC3	Q7Z5B4	369 aa		27.94	■■■□□ 2.06
RFWD3-208	ENST00000575113	TNS4	Q8IZW8	715 aa		27.94	■■■□□ 2.06
RFWD3-208	ENST00000575113	RTL5	Q5HYW3	569 aa	Predicted RBP	27.93	■■■□□ 2.06
RFWD3-208	ENST00000575113	USP50	Q70EL3	339 aa	Predicted RBP	27.93	■■■□□ 2.06
RFWD3-208	ENST00000575113	ADAMTSL1	Q8N6G6	1762 aa		27.93	■■■□□ 2.06
RFWD3-208	ENST00000575113	CXCL9	Q07325	125 aa		27.92	■■■□□ 2.06
RFWD3-208	ENST00000575113	KIAA2012	Q0VF49	1180 aa		27.92	■■■□□ 2.06
RFWD3-208	ENST00000575113	PCNT	O95613	3336 aa		27.92	■■■□□ 2.06
RFWD3-208	ENST00000575113	VEGFB	P49765	207 aa		27.9	■■■□□ 2.06
RFWD3-208	ENST00000575113	TRIM28	Q13263	835 aa	Known RBP	27.9	■■■□□ 2.06
RFWD3-208	ENST00000575113	SF3B3	Q15393	1217 aa	Known RBP	27.9	■■■□□ 2.06
RFWD3-208	ENST00000575113	CIAPIN1	Q6FI81	312 aa		27.9	■■■□□ 2.06
RFWD3-208	ENST00000575113	GPRC5D	Q9NZD1	345 aa		27.9	■■■□□ 2.06
RFWD3-208	ENST00000575113	LAMB2	P55268	1798 aa		27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	IRS4	O14654	1257 aa	Predicted RBP	27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	TNIP1	Q15025	636 aa		27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	CHMP4A	Q9BY43	222 aa		27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	ADARB2	Q9NS39	739 aa	Known RBP	27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	ABT1	Q9ULW3	272 aa	Known RBP	27.89	■■■□□ 2.06
RFWD3-208	ENST00000575113	GMPS	P49915	693 aa	Predicted RBP	27.88	■■■□□ 2.05
RFWD3-208	ENST00000575113	LTBP1	Q14766	1721 aa		27.88	■■■□□ 2.05
RFWD3-208	ENST00000575113	DEFB115	Q30KQ5	88 aa		27.88	■■■□□ 2.05
RFWD3-208	ENST00000575113	BCL2L13	Q9BXK5	485 aa		27.88	■■■□□ 2.05
RFWD3-208	ENST00000575113	PHAX	Q9H814	394 aa	Known RBP	27.88	■■■□□ 2.05
RFWD3-208	ENST00000575113	RAD17	O75943	681 aa		27.87	■■■□□ 2.05
RFWD3-208	ENST00000575113	HSP90B1	P14625	803 aa	Known RBP	27.87	■■■□□ 2.05
RFWD3-208	ENST00000575113	CELF1	Q92879	486 aa	Known RBP	27.87	■■■□□ 2.05
RFWD3-208	ENST00000575113	AIDA	Q96BJ3	306 aa		27.87	■■■□□ 2.05
RFWD3-208	ENST00000575113	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.87	■■■□□ 2.05
RFWD3-208	ENST00000575113	C8orf58	Q8NAV2	365 aa		27.86	■■■□□ 2.05
RFWD3-208	ENST00000575113	MYD88	Q99836	296 aa		27.86	■■■□□ 2.05
RFWD3-208	ENST00000575113	RASSF10	A6NK89	507 aa		27.85	■■■□□ 2.05
RFWD3-208	ENST00000575113	CCDC30	Q5VVM6	783 aa		27.85	■■■□□ 2.05
RFWD3-208	ENST00000575113	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.85	■■■□□ 2.05
RFWD3-208	ENST00000575113	C6orf229	H3BNL8	230 aa		27.84	■■■□□ 2.05
RFWD3-208	ENST00000575113	DDX58	O95786	925 aa	Known RBP	27.84	■■■□□ 2.05
RFWD3-208	ENST00000575113	WASHC4	Q2M389	1173 aa		27.84	■■■□□ 2.05
RFWD3-208	ENST00000575113	CAPN15	O75808	1086 aa		27.83	■■■□□ 2.05
RFWD3-208	ENST00000575113	CDHR2	Q9BYE9	1310 aa		27.83	■■■□□ 2.05
RFWD3-208	ENST00000575113	FMR1	Q06787	632 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
RFWD3-208	ENST00000575113	DDX60	Q8IY21	1712 aa	Known RBP	27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	TRAF5	O00463	557 aa		27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	RIMBP2	O15034	1052 aa		27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	FOXN1	O15353	648 aa		27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	RPS8	P62241	208 aa	Known RBP	27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	CCDC191	Q8NCU4	936 aa		27.81	■■■□□ 2.04
RFWD3-208	ENST00000575113	YDJC	A8MPS7	323 aa		27.8	■■■□□ 2.04
RFWD3-208	ENST00000575113	GPSM2	P81274	684 aa		27.8	■■■□□ 2.04
RFWD3-208	ENST00000575113	EYA3	Q99504	573 aa		27.8	■■■□□ 2.04
RFWD3-208	ENST00000575113	CWC25	Q9NXE8	425 aa	Predicted RBP	27.8	■■■□□ 2.04
RFWD3-208	ENST00000575113	WDR33	Q9C0J8	1336 aa	Known RBP	27.79	■■■□□ 2.04
RFWD3-208	ENST00000575113		H7C1D1	291 aa		27.79	■■■□□ 2.04
RFWD3-208	ENST00000575113	DBNDD1	Q9H9R9	158 aa		27.79	■■■□□ 2.04
RFWD3-208	ENST00000575113	CNOT7	Q9UIV1	285 aa	Known RBP	27.79	■■■□□ 2.04
RFWD3-208	ENST00000575113	DUOX1	Q9NRD9	1551 aa		27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	PCCA	P05165	728 aa	Predicted RBP	27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	CTCF	P49711	727 aa	Predicted RBP	27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	CCDC152	Q4G0S7	254 aa		27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	METTL22	Q9BUU2	404 aa	Predicted RBP	27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	POLL	Q9UGP5	575 aa		27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	TAF1	P21675	1872 aa		27.78	■■■□□ 2.04
RFWD3-208	ENST00000575113	CCDC184	Q52MB2	194 aa		27.77	■■■□□ 2.04
RFWD3-208	ENST00000575113	TSPYL6	Q8N831	410 aa		27.77	■■■□□ 2.04
RFWD3-208	ENST00000575113	TSR2	Q969E8	191 aa	Known RBP	27.77	■■■□□ 2.04
RFWD3-208	ENST00000575113	STK31	Q9BXU1	1019 aa		27.77	■■■□□ 2.04
RFWD3-208	ENST00000575113	LRRC37A	A6NMS7	1700 aa		27.77	■■■□□ 2.04
RFWD3-208	ENST00000575113	PDE8A	O60658	829 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	ECE1	P42892	770 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	GRM1	Q13255	1194 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	CST9	Q5W186	159 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	ZC3H15	Q8WU90	426 aa	Known RBP	27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	SEC31B	Q9NQW1	1179 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	WBP1L	Q9NX94	342 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	MAP3K2	Q9Y2U5	619 aa		27.76	■■■□□ 2.03
RFWD3-208	ENST00000575113	MAP2K1	Q02750	393 aa	Predicted RBP	27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	DOK7	Q18PE1	504 aa		27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	MICALL2	Q8IY33	904 aa		27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	TBC1D16	Q8TBP0	767 aa		27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	JARID2	Q92833	1246 aa	Predicted RBP	27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	ANKIB1	Q9P2G1	1089 aa		27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.75	■■■□□ 2.03
RFWD3-208	ENST00000575113		G3V3G9	751 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	PSMD14	O00487	310 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	ECE2	O60344	883 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	DCAF8	Q5TAQ9	597 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	TRPM4	Q8TD43	1214 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	CAPNS2	Q96L46	248 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	PRDM10	Q9NQV6	1147 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	PGAP2	Q9UHJ9	254 aa		27.74	■■■□□ 2.03
RFWD3-208	ENST00000575113	CELF2	O95319	508 aa	Known RBP	27.73	■■■□□ 2.03
RFWD3-208	ENST00000575113	CCDC27	Q2M243	656 aa		27.73	■■■□□ 2.03

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