RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 FZD9O00144 591 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 AOC3Q16853 763 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 GPC2Q8N158 579 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
NPLOC4-216ENST00000574344 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 BBOX1O75936 387 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 EPHX2P34913 555 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 MPNDQ8N594 471 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 KLRG1Q96E93 195 aa12.42□□□□□ -0.42
NPLOC4-216ENST00000574344 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 DNAJC5GQ8N7S2 189 aa12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 TRPM7Q96QT4 1865 aa12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
NPLOC4-216ENST00000574344 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 COL4A1P02462 1669 aa12.4□□□□□ -0.42
NPLOC4-216ENST00000574344 IL16Q14005 1332 aa12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 SF3B3Q15393 1217 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
NPLOC4-216ENST00000574344 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-216ENST00000574344 PCNTO95613 3336 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 SCNN1DP51172 638 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 KIAA2012Q0VF49 1180 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
NPLOC4-216ENST00000574344 PDE8AO60658 829 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 RAD17O75943 681 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 EPS15P42566 896 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 PSME4Q14997 1843 aa12.36□□□□□ -0.43
NPLOC4-216ENST00000574344 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 GPSM2P81274 684 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 CXCL9Q07325 125 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 FLIIQ13045 1269 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 TNIP1Q15025 636 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 G2E3Q7L622 706 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 JMYQ8N9B5 988 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 EYA3Q99504 573 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
NPLOC4-216ENST00000574344 TMEM88BA6NKF7 163 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 G3V3G9 751 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-216ENST00000574344 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 UFL1O94874 794 aa12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 CTSWP56202 376 aa12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 761.1 ms