RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 CTSWP56202 376 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 MEIS3Q99687 375 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 UTYO14607 1347 aa16.19■□□□□ 0.18
NPLOC4-214ENST00000573876 GNAI3P08754 354 aa16.18■□□□□ 0.18
NPLOC4-214ENST00000573876 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
NPLOC4-214ENST00000573876 EXOC6Q8TAG9 804 aa16.17■□□□□ 0.18
NPLOC4-214ENST00000573876 TMX4Q9H1E5 349 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-214ENST00000573876 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
NPLOC4-214ENST00000573876 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
NPLOC4-214ENST00000573876 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 LAMB2P55268 1798 aa16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 SUCLG2Q96I99 432 aa16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
NPLOC4-214ENST00000573876 BBOX1O75936 387 aa16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 NEFLP07196 543 aa16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 COL11A2P13942 1736 aaPredicted RBP16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 GRAPQ13588 217 aa16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 CDC5LQ99459 802 aaKnown RBP16.15■□□□□ 0.18
NPLOC4-214ENST00000573876 MYH3P11055 1940 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 GNAI2P04899 355 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 CSF1RP07333 972 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 FOXO4P98177 505 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 TMC4Q7Z404 712 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 ZBTB40Q9NUA8 1239 aa16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
NPLOC4-214ENST00000573876 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 GREM2Q9H772 168 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
NPLOC4-214ENST00000573876 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 C21orf2O43822 256 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 ITGA6P23229 1130 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 CC2D2BQ6DHV5 1058 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 ANKRD18AQ8IVF6 992 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
NPLOC4-214ENST00000573876 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
NPLOC4-214ENST00000573876 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
NPLOC4-214ENST00000573876 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
NPLOC4-214ENST00000573876 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
NPLOC4-214ENST00000573876 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
NPLOC4-214ENST00000573876 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
NPLOC4-214ENST00000573876 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
NPLOC4-214ENST00000573876 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
NPLOC4-214ENST00000573876 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
NPLOC4-214ENST00000573876 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 RTKN2Q8IZC4 609 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 ARFGEF1Q9Y6D6 1849 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 CACNA1SQ13698 1873 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 UTRNP46939 3433 aa16.09■□□□□ 0.17
NPLOC4-214ENST00000573876 ATP8B2P98198 1209 aa16.08■□□□□ 0.16
NPLOC4-214ENST00000573876 AAMPQ13685 434 aa16.07■□□□□ 0.16
NPLOC4-214ENST00000573876 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-214ENST00000573876 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-214ENST00000573876 MPNDQ8N594 471 aa16.06■□□□□ 0.16
NPLOC4-214ENST00000573876 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
NPLOC4-214ENST00000573876 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
NPLOC4-214ENST00000573876 TAF1P21675 1872 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 DPP8Q6V1X1 898 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
NPLOC4-214ENST00000573876 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 MTX1Q13505 466 aa16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 SIRT2Q8IXJ6 389 aa16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms