RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
RNF213-216ENST00000573548 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
RNF213-216ENST00000573548 SLC10A5Q5PT55 438 aa16.52■□□□□ 0.24
RNF213-216ENST00000573548 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.24
RNF213-216ENST00000573548 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
RNF213-216ENST00000573548 GRIN3BO60391 1043 aa16.51■□□□□ 0.23
RNF213-216ENST00000573548 CTSWP56202 376 aa16.51■□□□□ 0.23
RNF213-216ENST00000573548 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
RNF213-216ENST00000573548 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
RNF213-216ENST00000573548 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
RNF213-216ENST00000573548 SSH3Q8TE77 659 aa16.51■□□□□ 0.23
RNF213-216ENST00000573548 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
RNF213-216ENST00000573548 FOXO4P98177 505 aa16.5■□□□□ 0.23
RNF213-216ENST00000573548 G3BP1Q13283 466 aaKnown RBP eCLIP16.5■□□□□ 0.233e-9■■□□□ 11.5
RNF213-216ENST00000573548 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
RNF213-216ENST00000573548 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
RNF213-216ENST00000573548 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
RNF213-216ENST00000573548 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
RNF213-216ENST00000573548 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 CSF1RP07333 972 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 BRCA1P38398 1863 aaKnown RBP16.49■□□□□ 0.23
RNF213-216ENST00000573548 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
RNF213-216ENST00000573548 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 KAZALD1Q96I82 304 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 DCTPP1Q9H773 170 aa16.49■□□□□ 0.23
RNF213-216ENST00000573548 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
RNF213-216ENST00000573548 IGHDP01880 384 aa16.48■□□□□ 0.23
RNF213-216ENST00000573548 POLA2Q14181 598 aa16.48■□□□□ 0.23
RNF213-216ENST00000573548 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
RNF213-216ENST00000573548 TTLL11Q8NHH1 800 aa16.48■□□□□ 0.23
RNF213-216ENST00000573548 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
RNF213-216ENST00000573548 NUP98P52948 1817 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
RNF213-216ENST00000573548 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
RNF213-216ENST00000573548 PDE6BP35913 854 aa16.46■□□□□ 0.23
RNF213-216ENST00000573548 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
RNF213-216ENST00000573548 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
RNF213-216ENST00000573548 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
RNF213-216ENST00000573548 SMC5Q8IY18 1101 aa16.46■□□□□ 0.23
RNF213-216ENST00000573548 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
RNF213-216ENST00000573548 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
RNF213-216ENST00000573548 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
RNF213-216ENST00000573548 ITGA6P23229 1130 aa16.45■□□□□ 0.22
RNF213-216ENST00000573548 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
RNF213-216ENST00000573548 DDR1Q08345 913 aa16.45■□□□□ 0.22
RNF213-216ENST00000573548 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
RNF213-216ENST00000573548 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
RNF213-216ENST00000573548 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
RNF213-216ENST00000573548 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
RNF213-216ENST00000573548 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
RNF213-216ENST00000573548 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
RNF213-216ENST00000573548 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
RNF213-216ENST00000573548 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
RNF213-216ENST00000573548 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 NRXN2Q9P2S2 1712 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
RNF213-216ENST00000573548 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 GREM2Q9H772 168 aa16.43■□□□□ 0.22
RNF213-216ENST00000573548 CIAO1O76071 339 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 IL15P40933 162 aaPredicted RBP16.42■□□□□ 0.22
RNF213-216ENST00000573548 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
RNF213-216ENST00000573548 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
RNF213-216ENST00000573548 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 RIC1Q4ADV7 1423 aa16.42■□□□□ 0.22
RNF213-216ENST00000573548 TGFB2P61812 414 aa16.41■□□□□ 0.22
RNF213-216ENST00000573548 NUCB1Q02818 461 aa16.41■□□□□ 0.22
RNF213-216ENST00000573548 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
RNF213-216ENST00000573548 SIL1Q9H173 461 aa16.41■□□□□ 0.22
RNF213-216ENST00000573548 DLEC1Q9Y238 1755 aa16.41■□□□□ 0.22
RNF213-216ENST00000573548 H0YIN7 160 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 EYA2O00167 538 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 APBB1O00213 710 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
RNF213-216ENST00000573548 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
RNF213-216ENST00000573548 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
RNF213-216ENST00000573548 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
RNF213-216ENST00000573548 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
RNF213-216ENST00000573548 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
RNF213-216ENST00000573548 NPR1P16066 1061 aa16.39■□□□□ 0.21
RNF213-216ENST00000573548 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
RNF213-216ENST00000573548 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
RNF213-216ENST00000573548 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
RNF213-216ENST00000573548 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
RNF213-216ENST00000573548 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
RNF213-216ENST00000573548 BBOX1O75936 387 aa16.38■□□□□ 0.21
RNF213-216ENST00000573548 DPEP1P16444 411 aa16.38■□□□□ 0.21
RNF213-216ENST00000573548 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms