RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CXCL9Q07325 125 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 DPP8Q6V1X1 898 aaPredicted RBP19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 MPNDQ8N594 471 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 AIDAQ96BJ3 306 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 PRDM10Q9NQV6 1147 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 WBP1LQ9NX94 342 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 ZNRF3Q9ULT6 936 aa19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 ABT1Q9ULW3 272 aaKnown RBP19.24■□□□□ 0.67
NPLOC4-207ENST00000572346 GRAPQ13588 217 aa19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 GRAPLQ8TC17 118 aaPredicted RBP19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 GPRC5DQ9NZD1 345 aa19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 WDR33Q9C0J8 1336 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-207ENST00000572346 TRPM7Q96QT4 1865 aa19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 CTCFP49711 727 aaPredicted RBP19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 KIAA2012Q0VF49 1180 aa19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
NPLOC4-207ENST00000572346 HOXB7P09629 217 aa19.21■□□□□ 0.67
NPLOC4-207ENST00000572346 PLBD2Q8NHP8 589 aa19.21■□□□□ 0.67
NPLOC4-207ENST00000572346 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 TRAF5O00463 557 aa19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 GMPSP49915 693 aaPredicted RBP19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 CIAPIN1Q6FI81 312 aa19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
NPLOC4-207ENST00000572346 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
NPLOC4-207ENST00000572346 CST9Q5W186 159 aa19.19■□□□□ 0.66
NPLOC4-207ENST00000572346 CFAP44Q96MT7 982 aa19.19■□□□□ 0.66
NPLOC4-207ENST00000572346 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
NPLOC4-207ENST00000572346 RAD17O75943 681 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 LBX1P52954 281 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 MAP2K1Q02750 393 aaPredicted RBP19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 FAM89AQ96GI7 184 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 CDHR2Q9BYE9 1310 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 THSD7BQ9C0I4 1608 aa19.18■□□□□ 0.66
NPLOC4-207ENST00000572346 ATP5J2-PTCD1G3V325 749 aa19.17■□□□□ 0.66
NPLOC4-207ENST00000572346 DUSP27Q5VZP5 1158 aa19.17■□□□□ 0.66
NPLOC4-207ENST00000572346 HYPKQ9NX55 129 aa19.17■□□□□ 0.66
NPLOC4-207ENST00000572346 YDJCA8MPS7 323 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 HSPA8P11142 646 aaKnown RBP19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 TNIP1Q15025 636 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 SF3B3Q15393 1217 aaKnown RBP19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 PAXIP1Q6ZW49 1069 aaPredicted RBP19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 CELF1Q92879 486 aaKnown RBP19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 CAPNS2Q96L46 248 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 MBIPQ9NS73 344 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 PGAP2Q9UHJ9 254 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 TLL2Q9Y6L7 1015 aa19.16■□□□□ 0.66
NPLOC4-207ENST00000572346 ECE1P42892 770 aa19.15■□□□□ 0.66
NPLOC4-207ENST00000572346 CYP4F22Q6NT55 531 aa19.15■□□□□ 0.66
NPLOC4-207ENST00000572346 COL4A1P02462 1669 aa19.14■□□□□ 0.66
NPLOC4-207ENST00000572346 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
NPLOC4-207ENST00000572346 GRM1Q13255 1194 aa19.14■□□□□ 0.65
NPLOC4-207ENST00000572346 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
NPLOC4-207ENST00000572346 GLIS2Q9BZE0 524 aaPredicted RBP19.14■□□□□ 0.65
NPLOC4-207ENST00000572346 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
NPLOC4-207ENST00000572346 SHTN1A0MZ66 631 aa19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 CELF2O95319 508 aaKnown RBP19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 WASHC4Q2M389 1173 aa19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 TRPM4Q8TD43 1214 aa19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 ZC3H15Q8WU90 426 aaKnown RBP19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 GPR101Q96P66 508 aaPredicted RBP19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 CNOT7Q9UIV1 285 aaKnown RBP19.13■□□□□ 0.65
NPLOC4-207ENST00000572346 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
NPLOC4-207ENST00000572346 SAPCD2Q86UD0 394 aa19.12■□□□□ 0.65
NPLOC4-207ENST00000572346 APAF1O14727 1248 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 GPSM2P81274 684 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 MICALL2Q8IY33 904 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 DBNDD1Q9H9R9 158 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 POLLQ9UGP5 575 aa19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 ZBTB12Q9Y330 459 aaPredicted RBP19.11■□□□□ 0.65
NPLOC4-207ENST00000572346 C6orf229H3BNL8 230 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 H7C1D1 291 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 PSMD14O00487 310 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 RIMBP2O15034 1052 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 CDC37L1Q7L3B6 337 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 DPF2Q92785 391 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 IFT57Q9NWB7 429 aa19.1■□□□□ 0.65
NPLOC4-207ENST00000572346 ELL2O00472 640 aaPredicted RBP19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 AOC2O75106 756 aa19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 RPS8P62241 208 aaKnown RBP19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 GNAI1P63096 354 aa19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 ZBTB38Q8NAP3 1195 aaPredicted RBP19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 BEGAINQ9BUH8 593 aa19.09■□□□□ 0.65
NPLOC4-207ENST00000572346 MAP2K2P36507 400 aa19.08■□□□□ 0.64
NPLOC4-207ENST00000572346 HHIPL1Q96JK4 782 aa19.08■□□□□ 0.64
NPLOC4-207ENST00000572346 ZNF408Q9H9D4 720 aa19.08■□□□□ 0.64
NPLOC4-207ENST00000572346 ECE2O60344 883 aa19.07■□□□□ 0.64
NPLOC4-207ENST00000572346 CALD1Q05682 793 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms