RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
SPG7-222ENST00000569820 NUTM2AQ8IVF1 878 aaPredicted RBP14.34□□□□□ -0.11
SPG7-222ENST00000569820 SECISBP2LQ93073 1101 aaKnown RBP14.34□□□□□ -0.11
SPG7-222ENST00000569820 ATP2B3Q16720 1220 aa14.33□□□□□ -0.11
SPG7-222ENST00000569820 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.11
SPG7-222ENST00000569820 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.11
SPG7-222ENST00000569820 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.11
SPG7-222ENST00000569820 COL15A1P39059 1388 aa14.33□□□□□ -0.11
SPG7-222ENST00000569820 AOX1Q06278 1338 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 PHF14O94880 888 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
SPG7-222ENST00000569820 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 CASC1Q6TDU7 716 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 CDCA7Q9BWT1 371 aaPredicted RBP14.33□□□□□ -0.12
SPG7-222ENST00000569820 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.12
SPG7-222ENST00000569820 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
SPG7-222ENST00000569820 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
SPG7-222ENST00000569820 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
SPG7-222ENST00000569820 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
SPG7-222ENST00000569820 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 DNAJC10Q8IXB1 793 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 CASP7P55210 303 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 MPNDQ8N594 471 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
SPG7-222ENST00000569820 UVSSAQ2YD98 709 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 PDCL2Q8N4E4 241 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 SLC4A9Q96Q91 983 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
SPG7-222ENST00000569820 ANKRD36CQ5JPF3 1778 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 CICQ96RK0 1608 aaPredicted RBP14.3□□□□□ -0.12
SPG7-222ENST00000569820 FAM177BA6PVY3 158 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 REC8O95072 547 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 DDB1Q16531 1140 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 TTC12Q9H892 705 aaPredicted RBP14.3□□□□□ -0.12
SPG7-222ENST00000569820 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
SPG7-222ENST00000569820 USP42Q9H9J4 1324 aaKnown RBP14.3□□□□□ -0.12
SPG7-222ENST00000569820 BRD1O95696 1058 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 OS9Q13438 667 aaPredicted RBP14.29□□□□□ -0.12
SPG7-222ENST00000569820 RABL6Q3YEC7 729 aaPredicted RBP14.29□□□□□ -0.12
SPG7-222ENST00000569820 PI4K2BQ8TCG2 481 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 ZBTB3Q9H5J0 574 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 A0A087WZG4 1122 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 BARGINQ6ZT62 677 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
SPG7-222ENST00000569820 C17orf53Q8N3J3 647 aaPredicted RBP14.29□□□□□ -0.12
SPG7-222ENST00000569820 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
SPG7-222ENST00000569820 JCADQ9P266 1359 aa14.28□□□□□ -0.12
SPG7-222ENST00000569820 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
SPG7-222ENST00000569820 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
SPG7-222ENST00000569820 SASH1O94885 1247 aa14.27□□□□□ -0.12
SPG7-222ENST00000569820 UNC5CLQ8IV45 518 aa14.27□□□□□ -0.12
SPG7-222ENST00000569820 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.12
SPG7-222ENST00000569820 TMX3Q96JJ7 454 aa14.27□□□□□ -0.12
SPG7-222ENST00000569820 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.12
SPG7-222ENST00000569820 RREB1Q92766 1687 aa14.27□□□□□ -0.12
SPG7-222ENST00000569820 H7C1W4 665 aa14.27□□□□□ -0.13
SPG7-222ENST00000569820 ADCY5O95622 1261 aa14.27□□□□□ -0.13
SPG7-222ENST00000569820 STARD3NLO95772 234 aa14.27□□□□□ -0.13
SPG7-222ENST00000569820 RFX5P48382 616 aaPredicted RBP14.27□□□□□ -0.13
SPG7-222ENST00000569820 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.13
SPG7-222ENST00000569820 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
SPG7-222ENST00000569820 DIAPH3Q9NSV4 1193 aa14.27□□□□□ -0.13
SPG7-222ENST00000569820 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
SPG7-222ENST00000569820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
SPG7-222ENST00000569820 CYP19A1P11511 503 aaPredicted RBP14.26□□□□□ -0.13
SPG7-222ENST00000569820 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
SPG7-222ENST00000569820 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
SPG7-222ENST00000569820 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
SPG7-222ENST00000569820 TTC41PQ6P2S7 1318 aa14.26□□□□□ -0.13
SPG7-222ENST00000569820 MCM2P49736 904 aa14.26□□□□□ -0.13
SPG7-222ENST00000569820 NEK4P51957 841 aa14.26□□□□□ -0.13
SPG7-222ENST00000569820 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
SPG7-222ENST00000569820 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
SPG7-222ENST00000569820 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 ERC2O15083 957 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 NUP98P52948 1817 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
SPG7-222ENST00000569820 FOXO4P98177 505 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 G3BP1Q13283 466 aaKnown RBP eCLIP14.25□□□□□ -0.137e-7■■■■□ 23.9
SPG7-222ENST00000569820 RILPL2Q969X0 211 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 SIL1Q9H173 461 aa14.25□□□□□ -0.13
SPG7-222ENST00000569820 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
SPG7-222ENST00000569820 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.138e-11■□□□□ 8.6
SPG7-222ENST00000569820 CHMLP26374 656 aa14.24□□□□□ -0.13
SPG7-222ENST00000569820 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
SPG7-222ENST00000569820 ANKRD7Q92527 254 aa14.24□□□□□ -0.13
SPG7-222ENST00000569820 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
SPG7-222ENST00000569820 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
SPG7-222ENST00000569820 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPG7-222ENST00000569820 COL5A3P25940 1745 aaPredicted RBP14.23□□□□□ -0.13
SPG7-222ENST00000569820 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
SPG7-222ENST00000569820 ZBTB22O15209 634 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms