RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 NOGQ13253 232 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 DPP8Q6V1X1 898 aaPredicted RBP16.51■□□□□ 0.23
SNX29-207ENST00000568949 SP8Q8IXZ3 490 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 MPNDQ8N594 471 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
SNX29-207ENST00000568949 DGKZQ13574 1117 aa16.5■□□□□ 0.23
SNX29-207ENST00000568949 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
SNX29-207ENST00000568949 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
SNX29-207ENST00000568949 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
SNX29-207ENST00000568949 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
SNX29-207ENST00000568949 RAD17O75943 681 aa16.48■□□□□ 0.23
SNX29-207ENST00000568949 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
SNX29-207ENST00000568949 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
SNX29-207ENST00000568949 CNOT7Q9UIV1 285 aaKnown RBP16.48■□□□□ 0.23
SNX29-207ENST00000568949 H7C1D1 291 aa16.47■□□□□ 0.23
SNX29-207ENST00000568949 LAMB2P55268 1798 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 HUNKP57058 714 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 PDIA6Q15084 440 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 DPF2Q92785 391 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
SNX29-207ENST00000568949 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
SNX29-207ENST00000568949 YDJCA8MPS7 323 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 GRAPQ13588 217 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
SNX29-207ENST00000568949 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 GRAPLQ8TC17 118 aaPredicted RBP16.45■□□□□ 0.22
SNX29-207ENST00000568949 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 SAGE1Q9NXZ1 904 aa16.45■□□□□ 0.22
SNX29-207ENST00000568949 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
SNX29-207ENST00000568949 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
SNX29-207ENST00000568949 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
SNX29-207ENST00000568949 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
SNX29-207ENST00000568949 SHTN1A0MZ66 631 aa16.43■□□□□ 0.22
SNX29-207ENST00000568949 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
SNX29-207ENST00000568949 HCLS1P14317 486 aaPredicted RBP16.43■□□□□ 0.22
SNX29-207ENST00000568949 GBA2Q9HCG7 927 aaPredicted RBP16.43■□□□□ 0.22
SNX29-207ENST00000568949 SH3TC1Q8TE82 1336 aa16.43■□□□□ 0.22
SNX29-207ENST00000568949 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SNX29-207ENST00000568949 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
SNX29-207ENST00000568949 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
SNX29-207ENST00000568949 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
SNX29-207ENST00000568949 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
SNX29-207ENST00000568949 DUOX1Q9NRD9 1551 aa16.42■□□□□ 0.22
SNX29-207ENST00000568949 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
SNX29-207ENST00000568949 PSMD14O00487 310 aa16.41■□□□□ 0.22
SNX29-207ENST00000568949 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
SNX29-207ENST00000568949 SAMD7Q7Z3H4 446 aa16.41■□□□□ 0.22
SNX29-207ENST00000568949 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
SNX29-207ENST00000568949 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
SNX29-207ENST00000568949 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
SNX29-207ENST00000568949 TAF1P21675 1872 aa16.41■□□□□ 0.22
SNX29-207ENST00000568949 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
SNX29-207ENST00000568949 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
SNX29-207ENST00000568949 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
SNX29-207ENST00000568949 WASHC4Q2M389 1173 aa16.4■□□□□ 0.22
SNX29-207ENST00000568949 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
SNX29-207ENST00000568949 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
SNX29-207ENST00000568949 ANXA1P04083 346 aa16.39■□□□□ 0.21
SNX29-207ENST00000568949 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
SNX29-207ENST00000568949 DLK2Q6UY11 383 aa16.39■□□□□ 0.21
SNX29-207ENST00000568949 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
SNX29-207ENST00000568949 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
SNX29-207ENST00000568949 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
SNX29-207ENST00000568949 ZNF157P51786 506 aaPredicted RBP16.38■□□□□ 0.21
SNX29-207ENST00000568949 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
SNX29-207ENST00000568949 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
SNX29-207ENST00000568949 NSFL1CQ9UNZ2 370 aaKnown RBP16.38■□□□□ 0.21
SNX29-207ENST00000568949 ADM5C9JUS6 153 aa16.37■□□□□ 0.21
SNX29-207ENST00000568949 TRPA1O75762 1119 aa16.37■□□□□ 0.21
SNX29-207ENST00000568949 EGFRP00533 1210 aa16.37■□□□□ 0.21
SNX29-207ENST00000568949 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
SNX29-207ENST00000568949 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
SNX29-207ENST00000568949 SLC10A3P09131 477 aa16.36■□□□□ 0.21
SNX29-207ENST00000568949 SOX10P56693 466 aa16.36■□□□□ 0.21
SNX29-207ENST00000568949 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
SNX29-207ENST00000568949 EYA3Q99504 573 aa16.36■□□□□ 0.21
SNX29-207ENST00000568949 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
SNX29-207ENST00000568949 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SNX29-207ENST00000568949 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 RIMBP2O15034 1052 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
SNX29-207ENST00000568949 ECE2O60344 883 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 KIF4BQ2VIQ3 1234 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
SNX29-207ENST00000568949 CTU1Q7Z7A3 348 aaKnown RBP16.35■□□□□ 0.21
SNX29-207ENST00000568949 SULF1Q8IWU6 871 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
SNX29-207ENST00000568949 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
SNX29-207ENST00000568949 GPSM2P81274 684 aa16.34■□□□□ 0.21
SNX29-207ENST00000568949 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
SNX29-207ENST00000568949 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.2
SNX29-207ENST00000568949 RIPK4P57078 832 aa16.33■□□□□ 0.2
SNX29-207ENST00000568949 PRPF38BQ5VTL8 546 aaKnown RBP16.33■□□□□ 0.2
SNX29-207ENST00000568949 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
SNX29-207ENST00000568949 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms