RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 C16orf71Q8IYS4 520 aaPredicted RBP32.3■■■□□ 2.76
FANCA-228ENST00000567943 MIER1Q8N108 512 aa32.3■■■□□ 2.76
FANCA-228ENST00000567943 GRAPQ13588 217 aa32.29■■■□□ 2.76
FANCA-228ENST00000567943 GRAPLQ8TC17 118 aaPredicted RBP32.29■■■□□ 2.76
FANCA-228ENST00000567943 JARID2Q92833 1246 aaPredicted RBP32.29■■■□□ 2.76
FANCA-228ENST00000567943 LRRC37AA6NMS7 1700 aa32.29■■■□□ 2.76
FANCA-228ENST00000567943 FZD9O00144 591 aa32.28■■■□□ 2.76
FANCA-228ENST00000567943 SP8Q8IXZ3 490 aa32.28■■■□□ 2.76
FANCA-228ENST00000567943 CWC25Q9NXE8 425 aaPredicted RBP32.28■■■□□ 2.76
FANCA-228ENST00000567943 PCCAP05165 728 aaPredicted RBP32.26■■■□□ 2.75
FANCA-228ENST00000567943 CELF1Q92879 486 aaKnown RBP32.26■■■□□ 2.75
FANCA-228ENST00000567943 FLIIQ13045 1269 aa32.24■■■□□ 2.75
FANCA-228ENST00000567943 FSTL1Q12841 308 aa32.23■■■□□ 2.75
FANCA-228ENST00000567943 L3MBTL3Q96JM7 780 aaPredicted RBP32.23■■■□□ 2.75
FANCA-228ENST00000567943 RTFDC1Q9BY42 306 aaPredicted RBP32.23■■■□□ 2.75
FANCA-228ENST00000567943 SCN4AP35499 1836 aa32.23■■■□□ 2.75
FANCA-228ENST00000567943 DUOX1Q9NRD9 1551 aa32.23■■■□□ 2.75
FANCA-228ENST00000567943 CWF19L2Q2TBE0 894 aaKnown RBP32.22■■■□□ 2.75
FANCA-228ENST00000567943 NEURL1BA8MQ27 555 aa32.2■■■□□ 2.75
FANCA-228ENST00000567943 LARGE2Q8N3Y3 721 aa32.2■■■□□ 2.75
FANCA-228ENST00000567943 JDP2Q8WYK2 163 aa32.2■■■□□ 2.75
FANCA-228ENST00000567943 MPNDQ8N594 471 aa32.19■■■□□ 2.74
FANCA-228ENST00000567943 SMC1BQ8NDV3 1235 aa32.19■■■□□ 2.74
FANCA-228ENST00000567943 TMX4Q9H1E5 349 aaPredicted RBP32.19■■■□□ 2.74
FANCA-228ENST00000567943 SEC31BQ9NQW1 1179 aa32.19■■■□□ 2.74
FANCA-228ENST00000567943 LTBP1Q14766 1721 aa32.19■■■□□ 2.74
FANCA-228ENST00000567943 MYH3P11055 1940 aa32.18■■■□□ 2.74
FANCA-228ENST00000567943 PDE8AO60658 829 aa32.18■■■□□ 2.74
FANCA-228ENST00000567943 AOC3Q16853 763 aa32.18■■■□□ 2.74
FANCA-228ENST00000567943 DPP8Q6V1X1 898 aaPredicted RBP32.18■■■□□ 2.74
FANCA-228ENST00000567943 TMC4Q7Z404 712 aa32.18■■■□□ 2.74
FANCA-228ENST00000567943 CDHR2Q9BYE9 1310 aa32.18■■■□□ 2.74
FANCA-228ENST00000567943 E9PSI1 815 aa32.17■■■□□ 2.74
FANCA-228ENST00000567943 PPIP5K2O43314 1243 aa32.17■■■□□ 2.74
FANCA-228ENST00000567943 POTEIP0CG38 1075 aa32.17■■■□□ 2.74
FANCA-228ENST00000567943 POTEJP0CG39 1038 aa32.17■■■□□ 2.74
FANCA-228ENST00000567943 NEXNQ0ZGT2 675 aa32.17■■■□□ 2.74
FANCA-228ENST00000567943 FKBP5Q13451 457 aaPredicted RBP32.17■■■□□ 2.74
FANCA-228ENST00000567943 RPS8P62241 208 aaKnown RBP32.15■■■□□ 2.74
FANCA-228ENST00000567943 GPC2Q8N158 579 aa32.15■■■□□ 2.74
FANCA-228ENST00000567943 DNAAF4Q8WXU2 420 aa32.15■■■□□ 2.74
FANCA-228ENST00000567943 VPS33BQ9H267 617 aa32.15■■■□□ 2.74
FANCA-228ENST00000567943 HSP90B1P14625 803 aaKnown RBP32.14■■■□□ 2.74
FANCA-228ENST00000567943 APLP1P51693 650 aa32.14■■■□□ 2.74
FANCA-228ENST00000567943 SLFN5Q08AF3 891 aa32.14■■■□□ 2.74
FANCA-228ENST00000567943 CCDC85AQ96PX6 553 aaPredicted RBP32.14■■■□□ 2.74
FANCA-228ENST00000567943 TAF1DQ9H5J8 278 aaPredicted RBP32.14■■■□□ 2.74
FANCA-228ENST00000567943 H7C1W4 665 aa32.13■■■□□ 2.73
FANCA-228ENST00000567943 SUPT20HQ8NEM7 779 aa32.13■■■□□ 2.73
FANCA-228ENST00000567943 CDCA7LQ96GN5 454 aa32.13■■■□□ 2.73
FANCA-228ENST00000567943 IQCA1LA6NCM1 817 aa32.12■■■□□ 2.73
FANCA-228ENST00000567943 KIAA2012Q0VF49 1180 aa32.12■■■□□ 2.73
FANCA-228ENST00000567943 GCKRQ14397 625 aa32.12■■■□□ 2.73
FANCA-228ENST00000567943 CCDC152Q4G0S7 254 aa32.12■■■□□ 2.73
FANCA-228ENST00000567943 NIM1KQ8IY84 436 aa32.12■■■□□ 2.73
FANCA-228ENST00000567943 F6X3S4 739 aa32.11■■■□□ 2.73
FANCA-228ENST00000567943 EIF6P56537 245 aaKnown RBP32.11■■■□□ 2.73
FANCA-228ENST00000567943 GPSM2P81274 684 aa32.11■■■□□ 2.73
FANCA-228ENST00000567943 ADAMTSL1Q8N6G6 1762 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 CASP7P55210 303 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 CTSWP56202 376 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 HTRA3P83110 453 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 UBE3BQ7Z3V4 1068 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 LINS1Q8NG48 757 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 TTLL11Q8NHH1 800 aa32.1■■■□□ 2.73
FANCA-228ENST00000567943 DNAJC5GQ8N7S2 189 aa32.09■■■□□ 2.73
FANCA-228ENST00000567943 POLLQ9UGP5 575 aa32.09■■■□□ 2.73
FANCA-228ENST00000567943 HACL1Q9UJ83 578 aa32.09■■■□□ 2.73
FANCA-228ENST00000567943 NSFL1CQ9UNZ2 370 aaKnown RBP32.09■■■□□ 2.73
FANCA-228ENST00000567943 GJA3Q9Y6H8 435 aa32.09■■■□□ 2.73
FANCA-228ENST00000567943 ZNRF3Q9ULT6 936 aa32.08■■■□□ 2.73
FANCA-228ENST00000567943 SPEF2Q9C093 1822 aa32.07■■■□□ 2.73
FANCA-228ENST00000567943 CXCL9Q07325 125 aa32.07■■■□□ 2.72
FANCA-228ENST00000567943 EPHX2P34913 555 aa32.06■■■□□ 2.72
FANCA-228ENST00000567943 SCNN1DP51172 638 aa32.06■■■□□ 2.72
FANCA-228ENST00000567943 BEND3Q5T5X7 828 aa32.06■■■□□ 2.72
FANCA-228ENST00000567943 YDJCA8MPS7 323 aa32.05■■■□□ 2.72
FANCA-228ENST00000567943 CHADLQ6NUI6 762 aa32.05■■■□□ 2.72
FANCA-228ENST00000567943 PLA2G12BQ9BX93 195 aa32.05■■■□□ 2.72
FANCA-228ENST00000567943 GREM2Q9H772 168 aa32.05■■■□□ 2.72
FANCA-228ENST00000567943 TBC1D16Q8TBP0 767 aa32.04■■■□□ 2.72
FANCA-228ENST00000567943 GPR101Q96P66 508 aaPredicted RBP32.04■■■□□ 2.72
FANCA-228ENST00000567943 RTL9Q8NET4 1388 aa32.04■■■□□ 2.72
FANCA-228ENST00000567943 PCNTO95613 3336 aa32.03■■■□□ 2.72
FANCA-228ENST00000567943 LDHDQ86WU2 507 aa32.03■■■□□ 2.72
FANCA-228ENST00000567943 TRMT2AQ8IZ69 625 aaKnown RBP32.03■■■□□ 2.72
FANCA-228ENST00000567943 PODXL2Q9NZ53 605 aa32.03■■■□□ 2.72
FANCA-228ENST00000567943 WASHC4Q2M389 1173 aa32.02■■■□□ 2.72
FANCA-228ENST00000567943 C6orf229H3BNL8 230 aa32.01■■■□□ 2.71
FANCA-228ENST00000567943 EPS15P42566 896 aa32.01■■■□□ 2.71
FANCA-228ENST00000567943 RIMBP2O15034 1052 aa32■■■□□ 2.71
FANCA-228ENST00000567943 EAPPQ56P03 285 aaPredicted RBP32■■■□□ 2.71
FANCA-228ENST00000567943 ANKRD18AQ8IVF6 992 aa32■■■□□ 2.71
FANCA-228ENST00000567943 MRPL50Q8N5N7 158 aaKnown RBP32■■■□□ 2.71
FANCA-228ENST00000567943 RAD17O75943 681 aa31.99■■■□□ 2.71
FANCA-228ENST00000567943 SCN9AQ15858 1988 aa31.98■■■□□ 2.71
FANCA-228ENST00000567943 CSF1RP07333 972 aa31.98■■■□□ 2.71
FANCA-228ENST00000567943 CDC5LQ99459 802 aaKnown RBP31.98■■■□□ 2.71
FANCA-228ENST00000567943 CIAPIN1Q6FI81 312 aa31.97■■■□□ 2.71
FANCA-228ENST00000567943 PNMA8AQ86V59 439 aaPredicted RBP31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms