RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 RNF181Q9P0P0 153 aa27.48■■□□□ 1.99
NME3-210ENST00000567271 SBF1O95248 1867 aa27.47■■□□□ 1.99
NME3-210ENST00000567271 BRPF1P55201 1214 aaPredicted RBP27.47■■□□□ 1.99
NME3-210ENST00000567271 UBE3BQ7Z3V4 1068 aa27.47■■□□□ 1.99
NME3-210ENST00000567271 CASP7P55210 303 aa27.46■■□□□ 1.99
NME3-210ENST00000567271 SRCIN1Q9C0H9 1055 aa27.46■■□□□ 1.99
NME3-210ENST00000567271 ALDH1L1O75891 902 aa27.45■■□□□ 1.98
NME3-210ENST00000567271 ATP6V0A2Q9Y487 856 aa27.45■■□□□ 1.98
NME3-210ENST00000567271 SNED1Q8TER0 1413 aa27.44■■□□□ 1.98
NME3-210ENST00000567271 FKBP4Q02790 459 aaKnown RBP eCLIP27.44■■□□□ 1.98
NME3-210ENST00000567271 CCDC152Q4G0S7 254 aa27.44■■□□□ 1.98
NME3-210ENST00000567271 GRIPAP1Q4V328 841 aa27.44■■□□□ 1.98
NME3-210ENST00000567271 SLC51AQ86UW1 340 aa27.44■■□□□ 1.98
NME3-210ENST00000567271 NOB1Q9ULX3 412 aaKnown RBP27.44■■□□□ 1.98
NME3-210ENST00000567271 SP8Q8IXZ3 490 aa27.43■■□□□ 1.98
NME3-210ENST00000567271 CELF1Q92879 486 aaKnown RBP27.43■■□□□ 1.98
NME3-210ENST00000567271 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
NME3-210ENST00000567271 CTSWP56202 376 aa27.42■■□□□ 1.98
NME3-210ENST00000567271 TMX4Q9H1E5 349 aaPredicted RBP27.42■■□□□ 1.98
NME3-210ENST00000567271 SEC31BQ9NQW1 1179 aa27.42■■□□□ 1.98
NME3-210ENST00000567271 TAF1P21675 1872 aa27.41■■□□□ 1.98
NME3-210ENST00000567271 TMC4Q7Z404 712 aa27.41■■□□□ 1.98
NME3-210ENST00000567271 TTLL11Q8NHH1 800 aa27.41■■□□□ 1.98
NME3-210ENST00000567271 CCDC85AQ96PX6 553 aaPredicted RBP27.41■■□□□ 1.98
NME3-210ENST00000567271 PSMD1Q99460 953 aa27.41■■□□□ 1.98
NME3-210ENST00000567271 GRM8O00222 908 aa27.4■■□□□ 1.98
NME3-210ENST00000567271 RPS8P62241 208 aaKnown RBP27.39■■□□□ 1.98
NME3-210ENST00000567271 C9orf78Q9NZ63 289 aaPredicted RBP27.39■■□□□ 1.98
NME3-210ENST00000567271 CCDC88AQ3V6T2 1871 aa27.38■■□□□ 1.97
NME3-210ENST00000567271 COL4A1P02462 1669 aa27.38■■□□□ 1.97
NME3-210ENST00000567271 ZNF277Q9NRM2 450 aaPredicted RBP27.38■■□□□ 1.97
NME3-210ENST00000567271 ZC3H4Q9UPT8 1303 aaKnown RBP27.38■■□□□ 1.97
NME3-210ENST00000567271 CSF1RP07333 972 aa27.37■■□□□ 1.97
NME3-210ENST00000567271 API5Q9BZZ5 524 aaKnown RBP27.37■■□□□ 1.97
NME3-210ENST00000567271 KIF16BQ96L93 1317 aa27.37■■□□□ 1.97
NME3-210ENST00000567271 BCAR3O75815 825 aa27.36■■□□□ 1.97
NME3-210ENST00000567271 ARHGAP45Q92619 1136 aa27.36■■□□□ 1.97
NME3-210ENST00000567271 GREM2Q9H772 168 aa27.36■■□□□ 1.97
NME3-210ENST00000567271 RTL9Q8NET4 1388 aa27.35■■□□□ 1.97
NME3-210ENST00000567271 FOXO4P98177 505 aa27.35■■□□□ 1.97
NME3-210ENST00000567271 ZNF526Q8TF50 670 aaPredicted RBP27.35■■□□□ 1.97
NME3-210ENST00000567271 MYH3P11055 1940 aa27.35■■□□□ 1.97
NME3-210ENST00000567271 UTYO14607 1347 aa27.35■■□□□ 1.97
NME3-210ENST00000567271 IARSP41252 1262 aaKnown RBP27.34■■□□□ 1.97
NME3-210ENST00000567271 MPNDQ8N594 471 aa27.34■■□□□ 1.97
NME3-210ENST00000567271 GPBP1L1Q9HC44 474 aaPredicted RBP27.34■■□□□ 1.97
NME3-210ENST00000567271 NBPF7P0C2Y1 421 aaPredicted RBP27.33■■□□□ 1.97
NME3-210ENST00000567271 DPP8Q6V1X1 898 aaPredicted RBP27.33■■□□□ 1.97
NME3-210ENST00000567271 CDC5LQ99459 802 aaKnown RBP27.33■■□□□ 1.97
NME3-210ENST00000567271 RTFDC1Q9BY42 306 aaPredicted RBP27.33■■□□□ 1.97
NME3-210ENST00000567271 DICER1Q9UPY3 1922 aaKnown RBP27.33■■□□□ 1.97
NME3-210ENST00000567271 IPO8O15397 1037 aaKnown RBP27.32■■□□□ 1.96
NME3-210ENST00000567271 CCT4P50991 539 aaKnown RBP27.32■■□□□ 1.96
NME3-210ENST00000567271 ANKRD18AQ8IVF6 992 aa27.32■■□□□ 1.96
NME3-210ENST00000567271 LRRC37AA6NMS7 1700 aa27.31■■□□□ 1.96
NME3-210ENST00000567271 EPHA10Q5JZY3 1008 aa27.31■■□□□ 1.96
NME3-210ENST00000567271 SUPT20HQ8NEM7 779 aa27.31■■□□□ 1.96
NME3-210ENST00000567271 ITGA6P23229 1130 aa27.3■■□□□ 1.96
NME3-210ENST00000567271 FAM161AQ3B820 660 aa27.3■■□□□ 1.96
NME3-210ENST00000567271 USP44Q9H0E7 712 aa27.3■■□□□ 1.96
NME3-210ENST00000567271 VPS33BQ9H267 617 aa27.3■■□□□ 1.96
NME3-210ENST00000567271 TIAM2Q8IVF5 1701 aa27.3■■□□□ 1.96
NME3-210ENST00000567271 GPSM2P81274 684 aa27.29■■□□□ 1.96
NME3-210ENST00000567271 FRAT1Q92837 279 aaPredicted RBP27.29■■□□□ 1.96
NME3-210ENST00000567271 KAZALD1Q96I82 304 aa27.29■■□□□ 1.96
NME3-210ENST00000567271 SUCLG2Q96I99 432 aa27.29■■□□□ 1.96
NME3-210ENST00000567271 NSFL1CQ9UNZ2 370 aaKnown RBP27.29■■□□□ 1.96
NME3-210ENST00000567271 KDM2BQ8NHM5 1336 aa27.28■■□□□ 1.96
NME3-210ENST00000567271 GLTPD2A6NH11 291 aa27.28■■□□□ 1.96
NME3-210ENST00000567271 LMBR1LQ6UX01 489 aa27.28■■□□□ 1.96
NME3-210ENST00000567271 BSDC1Q9NW68 430 aaPredicted RBP27.28■■□□□ 1.96
NME3-210ENST00000567271 ATF7IPQ6VMQ6 1270 aa27.27■■□□□ 1.96
NME3-210ENST00000567271 LARGE2Q8N3Y3 721 aa27.27■■□□□ 1.96
NME3-210ENST00000567271 ANKRD18BA2A2Z9 1011 aa27.26■■□□□ 1.95
NME3-210ENST00000567271 TRIM27P14373 513 aa27.26■■□□□ 1.95
NME3-210ENST00000567271 DPY19L2Q6NUT2 758 aa27.26■■□□□ 1.95
NME3-210ENST00000567271 JDP2Q8WYK2 163 aa27.26■■□□□ 1.95
NME3-210ENST00000567271 PODXL2Q9NZ53 605 aa27.26■■□□□ 1.95
NME3-210ENST00000567271 PPIP5K2O43314 1243 aa27.25■■□□□ 1.95
NME3-210ENST00000567271 IGHMBP2P38935 993 aaKnown RBP27.25■■□□□ 1.95
NME3-210ENST00000567271 IFIT5Q13325 482 aaKnown RBP27.25■■□□□ 1.95
NME3-210ENST00000567271 AOC3Q16853 763 aa27.25■■□□□ 1.95
NME3-210ENST00000567271 INTS3Q68E01 1043 aaKnown RBP27.25■■□□□ 1.95
NME3-210ENST00000567271 POLLQ9UGP5 575 aa27.25■■□□□ 1.95
NME3-210ENST00000567271 CHMP3Q9Y3E7 222 aa27.25■■□□□ 1.95
NME3-210ENST00000567271 DUOX1Q9NRD9 1551 aa27.25■■□□□ 1.95
NME3-210ENST00000567271 FZD9O00144 591 aa27.24■■□□□ 1.95
NME3-210ENST00000567271 ZKSCAN2Q63HK3 967 aa27.24■■□□□ 1.95
NME3-210ENST00000567271 TNNQ9UQP3 1299 aa27.24■■□□□ 1.95
NME3-210ENST00000567271 COL4A5P29400 1685 aa27.24■■□□□ 1.95
NME3-210ENST00000567271 KIAA2012Q0VF49 1180 aa27.23■■□□□ 1.95
NME3-210ENST00000567271 TBC1D16Q8TBP0 767 aa27.23■■□□□ 1.95
NME3-210ENST00000567271 BICC1Q9H694 974 aaKnown RBP27.23■■□□□ 1.95
NME3-210ENST00000567271 NMRK2Q9NPI5 230 aa27.23■■□□□ 1.95
NME3-210ENST00000567271 ANKIB1Q9P2G1 1089 aa27.23■■□□□ 1.95
NME3-210ENST00000567271 MINPP1Q9UNW1 487 aa27.23■■□□□ 1.95
NME3-210ENST00000567271 CCDC57Q2TAC2 916 aa27.22■■□□□ 1.95
NME3-210ENST00000567271 RABL6Q3YEC7 729 aaPredicted RBP27.22■■□□□ 1.95
NME3-210ENST00000567271 MPHOSPH8Q99549 860 aa27.22■■□□□ 1.95
NME3-210ENST00000567271 LTBP1Q14766 1721 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms