RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	ALDH1L2	Q3SY69	923 aa		31.33	■■■□□ 2.61
PPP4C-209	ENST00000566749	UBE3B	Q7Z3V4	1068 aa		31.33	■■■□□ 2.61
PPP4C-209	ENST00000566749	ATP6V0A2	Q9Y487	856 aa		31.33	■■■□□ 2.61
PPP4C-209	ENST00000566749	GRIPAP1	Q4V328	841 aa		31.32	■■■□□ 2.6
PPP4C-209	ENST00000566749	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.32	■■■□□ 2.6
PPP4C-209	ENST00000566749	DICER1	Q9UPY3	1922 aa	Known RBP	31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749		H7C1W4	665 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	BEND3	Q5T5X7	828 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	SLC4A10	Q6U841	1118 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	SLC51A	Q86UW1	340 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	SMC4	Q9NTJ3	1288 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	TIAM2	Q8IVF5	1701 aa		31.31	■■■□□ 2.6
PPP4C-209	ENST00000566749	CCDC152	Q4G0S7	254 aa		31.3	■■■□□ 2.6
PPP4C-209	ENST00000566749	SNED1	Q8TER0	1413 aa		31.3	■■■□□ 2.6
PPP4C-209	ENST00000566749	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.3	■■■□□ 2.6
PPP4C-209	ENST00000566749	SP8	Q8IXZ3	490 aa		31.29	■■■□□ 2.6
PPP4C-209	ENST00000566749	PSMD1	Q99460	953 aa		31.29	■■■□□ 2.6
PPP4C-209	ENST00000566749	PTPRC	P08575	1304 aa		31.28	■■■□□ 2.6
PPP4C-209	ENST00000566749	CELF1	Q92879	486 aa	Known RBP	31.28	■■■□□ 2.6
PPP4C-209	ENST00000566749	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.28	■■■□□ 2.6
PPP4C-209	ENST00000566749	TMC4	Q7Z404	712 aa		31.27	■■■□□ 2.6
PPP4C-209	ENST00000566749	CTSW	P56202	376 aa		31.27	■■■□□ 2.6
PPP4C-209	ENST00000566749	MYH3	P11055	1940 aa		31.26	■■■□□ 2.59
PPP4C-209	ENST00000566749	KDM2B	Q8NHM5	1336 aa		31.26	■■■□□ 2.59
PPP4C-209	ENST00000566749	SEC31B	Q9NQW1	1179 aa		31.26	■■■□□ 2.59
PPP4C-209	ENST00000566749	IARS	P41252	1262 aa	Known RBP	31.25	■■■□□ 2.59
PPP4C-209	ENST00000566749	SRCIN1	Q9C0H9	1055 aa		31.25	■■■□□ 2.59
PPP4C-209	ENST00000566749	RPS8	P62241	208 aa	Known RBP	31.24	■■■□□ 2.59
PPP4C-209	ENST00000566749	ZBED9	Q6R2W3	1325 aa		31.23	■■■□□ 2.59
PPP4C-209	ENST00000566749	ALDH1L1	O75891	902 aa		31.23	■■■□□ 2.59
PPP4C-209	ENST00000566749	CASP7	P55210	303 aa		31.23	■■■□□ 2.59
PPP4C-209	ENST00000566749	TTLL11	Q8NHH1	800 aa		31.23	■■■□□ 2.59
PPP4C-209	ENST00000566749	DPP8	Q6V1X1	898 aa	Predicted RBP	31.22	■■■□□ 2.59
PPP4C-209	ENST00000566749	MPND	Q8N594	471 aa		31.22	■■■□□ 2.59
PPP4C-209	ENST00000566749	COL4A1	P02462	1669 aa		31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	GLTPD2	A6NH11	291 aa		31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	DPY19L2	Q6NUT2	758 aa		31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	PLA2G12B	Q9BX93	195 aa		31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	RARS	P54136	660 aa	Known RBP	31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	NMRK2	Q9NPI5	230 aa		31.21	■■■□□ 2.59
PPP4C-209	ENST00000566749	GRM8	O00222	908 aa		31.2	■■■□□ 2.58
PPP4C-209	ENST00000566749	SUPT20H	Q8NEM7	779 aa		31.19	■■■□□ 2.58
PPP4C-209	ENST00000566749	GREM2	Q9H772	168 aa		31.19	■■■□□ 2.58
PPP4C-209	ENST00000566749	LRRC37A	A6NMS7	1700 aa		31.19	■■■□□ 2.58
PPP4C-209	ENST00000566749	ANKRD18A	Q8IVF6	992 aa		31.18	■■■□□ 2.58
PPP4C-209	ENST00000566749	JDP2	Q8WYK2	163 aa		31.18	■■■□□ 2.58
PPP4C-209	ENST00000566749	CDC5L	Q99459	802 aa	Known RBP	31.18	■■■□□ 2.58
PPP4C-209	ENST00000566749	NOB1	Q9ULX3	412 aa	Known RBP	31.18	■■■□□ 2.58
PPP4C-209	ENST00000566749	LARGE2	Q8N3Y3	721 aa		31.17	■■■□□ 2.58
PPP4C-209	ENST00000566749	RTFDC1	Q9BY42	306 aa	Predicted RBP	31.17	■■■□□ 2.58
PPP4C-209	ENST00000566749	BRPF1	P55201	1214 aa	Predicted RBP	31.16	■■■□□ 2.58
PPP4C-209	ENST00000566749	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.16	■■■□□ 2.58
PPP4C-209	ENST00000566749	RTL9	Q8NET4	1388 aa		31.16	■■■□□ 2.58
PPP4C-209	ENST00000566749	KIF3C	O14782	793 aa		31.15	■■■□□ 2.58
PPP4C-209	ENST00000566749	PPIP5K2	O43314	1243 aa		31.15	■■■□□ 2.58
PPP4C-209	ENST00000566749	RRAGC	Q9HB90	399 aa		31.15	■■■□□ 2.58
PPP4C-209	ENST00000566749	VPS33B	Q9H267	617 aa		31.14	■■■□□ 2.58
PPP4C-209	ENST00000566749	CSF1R	P07333	972 aa		31.14	■■■□□ 2.57
PPP4C-209	ENST00000566749	AOC3	Q16853	763 aa		31.14	■■■□□ 2.57
PPP4C-209	ENST00000566749	GPSM2	P81274	684 aa		31.13	■■■□□ 2.57
PPP4C-209	ENST00000566749	FAM161A	Q3B820	660 aa		31.13	■■■□□ 2.57
PPP4C-209	ENST00000566749	API5	Q9BZZ5	524 aa	Known RBP	31.12	■■■□□ 2.57
PPP4C-209	ENST00000566749	KIF16B	Q96L93	1317 aa		31.12	■■■□□ 2.57
PPP4C-209	ENST00000566749	FZD9	O00144	591 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	DDN	O94850	711 aa	Predicted RBP	31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	ITGA6	P23229	1130 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	FOXO4	P98177	505 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	NIM1K	Q8IY84	436 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	CHMP3	Q9Y3E7	222 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	COL4A5	P29400	1685 aa		31.11	■■■□□ 2.57
PPP4C-209	ENST00000566749	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.1	■■■□□ 2.57
PPP4C-209	ENST00000566749	C1QTNF8	P60827	252 aa		31.1	■■■□□ 2.57
PPP4C-209	ENST00000566749	ANKIB1	Q9P2G1	1089 aa		31.1	■■■□□ 2.57
PPP4C-209	ENST00000566749	ZNF541	Q9H0D2	1346 aa		31.1	■■■□□ 2.57
PPP4C-209	ENST00000566749	DUOX1	Q9NRD9	1551 aa		31.1	■■■□□ 2.57
PPP4C-209	ENST00000566749	SPEF2	Q9C093	1822 aa		31.09	■■■□□ 2.57
PPP4C-209	ENST00000566749	C6orf229	H3BNL8	230 aa		31.09	■■■□□ 2.57
PPP4C-209	ENST00000566749	IGHMBP2	P38935	993 aa	Known RBP	31.09	■■■□□ 2.57
PPP4C-209	ENST00000566749	EIF6	P56537	245 aa	Known RBP	31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	KIAA2012	Q0VF49	1180 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	BSDC1	Q9NW68	430 aa	Predicted RBP	31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	UTY	O14607	1347 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	ANKRD18B	A2A2Z9	1011 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	VEGFA	P15692	232 aa	Predicted RBP	31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	EPHA10	Q5JZY3	1008 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	LMBR1L	Q6UX01	489 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	POLL	Q9UGP5	575 aa		31.08	■■■□□ 2.57
PPP4C-209	ENST00000566749	WDR90	Q96KV7	1748 aa		31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	BCAR3	O75815	825 aa		31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	CCT4	P50991	539 aa	Known RBP	31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	WASHC4	Q2M389	1173 aa		31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	SUCLG2	Q96I99	432 aa		31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	PODXL2	Q9NZ53	605 aa		31.07	■■■□□ 2.56
PPP4C-209	ENST00000566749	IFIT5	Q13325	482 aa	Known RBP	31.06	■■■□□ 2.56
PPP4C-209	ENST00000566749	TBC1D16	Q8TBP0	767 aa		31.06	■■■□□ 2.56
PPP4C-209	ENST00000566749	ARHGAP45	Q92619	1136 aa		31.06	■■■□□ 2.56
PPP4C-209	ENST00000566749	MPHOSPH8	Q99549	860 aa		31.06	■■■□□ 2.56
PPP4C-209	ENST00000566749	LTBP1	Q14766	1721 aa		31.06	■■■□□ 2.56

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