RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 SHANK3Q9BYB0 1731 aa14.74□□□□□ -0.05
SCAMP2-207ENST00000566480 PIGBQ92521 554 aa14.74□□□□□ -0.05
SCAMP2-207ENST00000566480 JAKMIP1Q96N16 626 aaKnown RBP14.74□□□□□ -0.05
SCAMP2-207ENST00000566480 CWC25Q9NXE8 425 aaPredicted RBP14.74□□□□□ -0.05
SCAMP2-207ENST00000566480 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.74□□□□□ -0.05
SCAMP2-207ENST00000566480 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 RUFY3Q7L099 469 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 ZNF589Q86UQ0 364 aaPredicted RBP14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 DNAJC10Q8IXB1 793 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 SYTL4Q96C24 671 aaPredicted RBP14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 LMBRD1Q9NUN5 540 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 H7C1W4 665 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 LARGE1O95461 756 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 SKOR2Q2VWA4 1001 aaPredicted RBP14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 TTC14Q96N46 770 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 NEUROD6Q96NK8 337 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 TAF6LQ9Y6J9 622 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 CCDC171Q6TFL3 1326 aa14.73□□□□□ -0.05
SCAMP2-207ENST00000566480 IL17RAQ96F46 866 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 TCEANC2Q96MN5 208 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 TIMM10P62072 90 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 SLFNL1Q499Z3 407 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 LRRC24Q50LG9 513 aa14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 CAVIN1Q6NZI2 390 aaKnown RBP14.72□□□□□ -0.05
SCAMP2-207ENST00000566480 NECTIN1Q15223 517 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 DDX46Q7L014 1031 aaKnown RBP14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 SEC62Q99442 399 aaKnown RBP14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 QTRT2Q9H974 415 aaKnown RBP14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 GRPEL1Q9HAV7 217 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 UBR2Q8IWV8 1755 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 TOGARAM1Q9Y4F4 1720 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 A0A0G2JS52 829 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 EPB41L2O43491 1005 aaKnown RBP14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.05
SCAMP2-207ENST00000566480 ERBB4Q15303 1308 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 BRD1O95696 1058 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 CREB3L3Q68CJ9 461 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 INTS4Q96HW7 963 aaKnown RBP14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 PUS3Q9BZE2 481 aaKnown RBP14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 GDPD2Q9HCC8 539 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 NSFL1CQ9UNZ2 370 aaKnown RBP14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 ATRNO75882 1429 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 ATG9AQ7Z3C6 839 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 FAM89AQ96GI7 184 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
SCAMP2-207ENST00000566480 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 MAP4K1Q92918 833 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 PDRG1Q9NUG6 133 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 ATP5JP18859 108 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 CCDC83Q8IWF9 413 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 CCDC191Q8NCU4 936 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 LIMCH1Q9UPQ0 1083 aa14.69□□□□□ -0.06
SCAMP2-207ENST00000566480 SLC27A2O14975 620 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 PTMSP20962 102 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 GPTP24298 496 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 COL15A1P39059 1388 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 NUP188Q5SRE5 1749 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 WNK3Q9BYP7 1800 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 MRE11P49959 708 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 CYP46A1Q9Y6A2 500 aa14.68□□□□□ -0.06
SCAMP2-207ENST00000566480 HIP1O00291 1037 aa14.67□□□□□ -0.06
SCAMP2-207ENST00000566480 SLC4A9Q96Q91 983 aa14.67□□□□□ -0.06
SCAMP2-207ENST00000566480 GOLIM4O00461 696 aa14.67□□□□□ -0.06
SCAMP2-207ENST00000566480 HLFQ16534 295 aa14.67□□□□□ -0.06
SCAMP2-207ENST00000566480 ZSWIM6Q9HCJ5 1215 aa14.67□□□□□ -0.06
SCAMP2-207ENST00000566480 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 TJP1Q07157 1748 aa14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 FAM98CQ17RN3 349 aaKnown RBP14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 ME3Q16798 604 aa14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 RPAP1Q9BWH6 1393 aaPredicted RBP14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 MED23Q9ULK4 1368 aa14.66□□□□□ -0.06
SCAMP2-207ENST00000566480 TCHHQ07283 1943 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 TAF5LO75529 589 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 ZSCAN23Q3MJ62 389 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 ISCA1Q9BUE6 129 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 ZNF609O15014 1411 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 EYA2O00167 538 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 ST3GAL1Q11201 340 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 KIF6Q6ZMV9 814 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 HAUS7Q99871 368 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 TPCN1Q9ULQ1 816 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
SCAMP2-207ENST00000566480 A0A1B0GUL7 405 aa14.64□□□□□ -0.07
SCAMP2-207ENST00000566480 STARD3NLO95772 234 aa14.64□□□□□ -0.07
SCAMP2-207ENST00000566480 SYT1P21579 422 aa14.64□□□□□ -0.07
SCAMP2-207ENST00000566480 KCNB2Q92953 911 aa14.64□□□□□ -0.07
SCAMP2-207ENST00000566480 ZBTB1Q9Y2K1 713 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms