RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PPP1R3GB7ZBB8 358 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 RECKO95980 971 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 MAPK1P28482 360 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 PBX2P40425 430 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 TNNI2P48788 182 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 SLC4A10Q6U841 1118 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 DEFB132Q7Z7B7 95 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 ANP32BQ92688 251 aaKnown RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 ZDHHC16Q969W1 377 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 HDAC9Q9UKV0 1011 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 SLIT3O75094 1523 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 TTC36A6NLP5 189 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 TK2O00142 265 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 PLSCR1O15162 318 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 LDHAP00338 332 aaKnown RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 COL9A1P20849 921 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 PSME1Q06323 249 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 ARSIQ5FYB1 569 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 ZNF687Q8N1G0 1237 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 TMC1Q8TDI8 760 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 CCDC34Q96HJ3 373 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 SPC25Q9HBM1 224 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 KIF15Q9NS87 1388 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 NRXN1Q9ULB1 1477 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 GOLGA6CA6NDK9 693 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 GOLGA6BA6NDN3 693 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 ST18O60284 1047 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 FOSP01100 380 aaPredicted RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 GOLGA6DP0CG33 693 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 CHMP4BP1P59074 171 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 C6orf132Q5T0Z8 1188 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 KHSRPQ92945 711 aaKnown RBP eCLIP3.81□□□□□ -1.82e-6■■■■□ 19.6
CHD9-216ENST00000565803 NEUROD6Q96NK8 337 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 ZBED2Q9BTP6 218 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 REPIN1Q9BWE0 567 aaKnown RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 IRF2BPLQ9H1B7 796 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 GOLGA6AQ9NYA3 693 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 TNS3Q68CZ2 1445 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 C3orf80F5H4A9 247 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 SSTR3P32745 418 aaPredicted RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 GJA5P36382 358 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 PPM1FP49593 454 aaPredicted RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 CLK2P49760 499 aaKnown RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 FSTL1Q12841 308 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 SLFNL1Q499Z3 407 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 CFAP70Q5T0N1 1121 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHD9-216ENST00000565803 ATL2Q8NHH9 583 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 PXYLP1Q8TE99 480 aa3.81□□□□□ -1.8
CHD9-216ENST00000565803 SLKQ9H2G2 1235 aaPredicted RBP3.81□□□□□ -1.8
CHD9-216ENST00000565803 XPCQ01831 940 aaPredicted RBP3.8□□□□□ -1.8
CHD9-216ENST00000565803 HDAC1Q13547 482 aaPredicted RBP3.8□□□□□ -1.8
CHD9-216ENST00000565803 COL13A1Q5TAT6 717 aaPredicted RBP3.8□□□□□ -1.8
CHD9-216ENST00000565803 EGFLAMQ63HQ2 1017 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 DNAJC14Q6Y2X3 702 aaPredicted RBP3.8□□□□□ -1.8
CHD9-216ENST00000565803 TNS4Q8IZW8 715 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 INTUQ9ULD6 942 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 DNAJC6O75061 913 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 CD53P19397 219 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 MTMR14Q8NCE2 650 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 PCDH12Q9NPG4 1184 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 G3V3G9 751 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 BDNFP23560 247 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 COPB2P35606 906 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 PRSS12P56730 875 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 SYCP2LQ5T4T6 812 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 C10orf62Q5T681 223 aaPredicted RBP3.8□□□□□ -1.8
CHD9-216ENST00000565803 PPP1R18Q6NYC8 613 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 NLGN1Q8N2Q7 840 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 SWAP70Q9UH65 585 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 RPS6KL1Q9Y6S9 549 aa3.8□□□□□ -1.8
CHD9-216ENST00000565803 ITSN1Q15811 1721 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 ADAMTSL1Q8N6G6 1762 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 KRT18P05783 430 aaKnown RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 CT47B1P0C2W7 299 aaPredicted RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 CNGA1P29973 690 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 ZRSR2Q15696 482 aaKnown RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 SEPT12Q8IYM1 358 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 PNISRQ8TF01 805 aaKnown RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 STK32AQ8WU08 396 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 TSR2Q969E8 191 aaKnown RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 LRRC27Q9C0I9 530 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 ZNF211Q13398 564 aaPredicted RBP3.79□□□□□ -1.8
CHD9-216ENST00000565803 PPP2R5AQ15172 486 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 TOMM20Q15388 145 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 PLEKHG6Q3KR16 790 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 GLYCTKQ8IVS8 523 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 MPNDQ8N594 471 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 MRFAP1L1Q96HT8 127 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 WASHC2CQ9Y4E1 1318 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 LTBP1Q14766 1721 aa3.79□□□□□ -1.8
CHD9-216ENST00000565803 MEGF6O75095 1541 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 H3BRB1 525 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 EVA1CP58658 441 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 R3HDM1Q15032 1099 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 CLEC4GQ6UXB4 293 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 RPAINQ86UA6 219 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms