RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 JDP2Q8WYK2 163 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 ATP6V0A2Q9Y487 856 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 MYH3P11055 1940 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 VAMP4O75379 141 aa15.69■□□□□ 0.1
SPG7-211ENST00000565370 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
SPG7-211ENST00000565370 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
SPG7-211ENST00000565370 RRAGCQ9HB90 399 aa15.69■□□□□ 0.1
SPG7-211ENST00000565370 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
SPG7-211ENST00000565370 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
SPG7-211ENST00000565370 VEGFAP15692 232 aaPredicted RBP15.68■□□□□ 0.1
SPG7-211ENST00000565370 CCDC152Q4G0S7 254 aa15.68■□□□□ 0.1
SPG7-211ENST00000565370 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
SPG7-211ENST00000565370 G2E3Q7L622 706 aa15.68■□□□□ 0.1
SPG7-211ENST00000565370 LARGE2Q8N3Y3 721 aa15.68■□□□□ 0.1
SPG7-211ENST00000565370 DNAAF4Q8WXU2 420 aa15.68■□□□□ 0.1
SPG7-211ENST00000565370 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
SPG7-211ENST00000565370 PDE8AO60658 829 aa15.67■□□□□ 0.1
SPG7-211ENST00000565370 COL13A1Q5TAT6 717 aaPredicted RBP15.67■□□□□ 0.1
SPG7-211ENST00000565370 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
SPG7-211ENST00000565370 SCN4AP35499 1836 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 TAF1P21675 1872 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 PPIP5K2O43314 1243 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
SPG7-211ENST00000565370 NIM1KQ8IY84 436 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 MPNDQ8N594 471 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
SPG7-211ENST00000565370 IGKV5-2P06315 115 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
SPG7-211ENST00000565370 FSTL1Q12841 308 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
SPG7-211ENST00000565370 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 KLRG1Q96E93 195 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 ZNF541Q9H0D2 1346 aa15.65■□□□□ 0.1
SPG7-211ENST00000565370 DDNO94850 711 aaPredicted RBP15.64■□□□□ 0.09
SPG7-211ENST00000565370 CTSWP56202 376 aa15.64■□□□□ 0.09
SPG7-211ENST00000565370 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
SPG7-211ENST00000565370 DUOX1Q9NRD9 1551 aa15.64■□□□□ 0.09
SPG7-211ENST00000565370 FZD9O00144 591 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 CAPN15O75808 1086 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 AOC3Q16853 763 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 GPC2Q8N158 579 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 CELF1Q92879 486 aaKnown RBP15.63■□□□□ 0.09
SPG7-211ENST00000565370 CDC5LQ99459 802 aaKnown RBP15.63■□□□□ 0.09
SPG7-211ENST00000565370 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
SPG7-211ENST00000565370 COL4A5P29400 1685 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
SPG7-211ENST00000565370 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
SPG7-211ENST00000565370 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
SPG7-211ENST00000565370 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
SPG7-211ENST00000565370 GCKRQ14397 625 aa15.62■□□□□ 0.09
SPG7-211ENST00000565370 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
SPG7-211ENST00000565370 RTL9Q8NET4 1388 aa15.62■□□□□ 0.09
SPG7-211ENST00000565370 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
SPG7-211ENST00000565370 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
SPG7-211ENST00000565370 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
SPG7-211ENST00000565370 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
SPG7-211ENST00000565370 CCDC85AQ96PX6 553 aaPredicted RBP15.61■□□□□ 0.09
SPG7-211ENST00000565370 EYA3Q99504 573 aa15.61■□□□□ 0.09
SPG7-211ENST00000565370 COL4A1P02462 1669 aa15.6■□□□□ 0.09
SPG7-211ENST00000565370 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
SPG7-211ENST00000565370 NSFL1CQ9UNZ2 370 aaKnown RBP15.6■□□□□ 0.09
SPG7-211ENST00000565370 GJA3Q9Y6H8 435 aa15.6■□□□□ 0.09
SPG7-211ENST00000565370 F6X3S4 739 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 H7C1W4 665 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SPG7-211ENST00000565370 PLA2G12BQ9BX93 195 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 PTPRCP08575 1304 aa15.59■□□□□ 0.09
SPG7-211ENST00000565370 POTECB2RU33 542 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 C6orf229H3BNL8 230 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 WASHC4Q2M389 1173 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 BEND3Q5T5X7 828 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 SLC4A10Q6U841 1118 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 SRCIN1Q9C0H9 1055 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 XDHP47989 1333 aa15.58■□□□□ 0.08
SPG7-211ENST00000565370 ALDH1L1O75891 902 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 UFL1O94874 794 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 EPHX2P34913 555 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 IGHMBP2P38935 993 aaKnown RBP15.57■□□□□ 0.08
SPG7-211ENST00000565370 GPSM2P81274 684 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 ALDH1L2Q3SY69 923 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 PNMA8AQ86V59 439 aaPredicted RBP15.57■□□□□ 0.08
SPG7-211ENST00000565370 LDHDQ86WU2 507 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 TTLL11Q8NHH1 800 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
SPG7-211ENST00000565370 GREM2Q9H772 168 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
SPG7-211ENST00000565370 GRM8O00222 908 aa15.56■□□□□ 0.08
SPG7-211ENST00000565370 EAPPQ56P03 285 aaPredicted RBP15.56■□□□□ 0.08
SPG7-211ENST00000565370 CIAPIN1Q6FI81 312 aa15.56■□□□□ 0.08
SPG7-211ENST00000565370 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms