RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 LMBRD1Q9NUN5 540 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 KCPQ6ZWJ8 1503 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PKP1Q13835 747 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 NECTIN1Q15223 517 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TTC39AQ5SRH9 613 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 RASEFQ8IZ41 740 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 SYTL4Q96C24 671 aaPredicted RBP6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CHMP4CQ96CF2 233 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 DBNDD2Q9BQY9 259 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 SNRKQ9NRH2 765 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FBXO3Q9UK99 471 aa6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FGD1P98174 961 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FAM43AQ8N2R8 423 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 A0A0D9SFI3 127 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PDCP20941 246 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 IFIT5Q13325 482 aaKnown RBP6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PIGBQ92521 554 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 HELLSQ9NRZ9 838 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PAG1Q9NWQ8 432 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 NHSL1Q5SYE7 1610 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PCCAP05165 728 aaPredicted RBP6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 HMGB1P09429 215 aaKnown RBP6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 IFIT1P09914 478 aaKnown RBP6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZSCAN22P10073 491 aaPredicted RBP6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CCDC83Q8IWF9 413 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 DNAJC10Q8IXB1 793 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ISCA1Q9BUE6 129 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ABCA3Q99758 1704 aa6.07□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 A0A0G2JS52 829 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 STX6O43752 255 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZSCAN23Q3MJ62 389 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 KBTBD3Q8NAB2 608 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZDHHC9Q9Y397 364 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 MAP3K15Q6ZN16 1313 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 RPS6KB1P23443 525 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZNF445P59923 1031 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TRIM28Q13263 835 aaKnown RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZBTB38Q8NAP3 1195 aaPredicted RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 RTN4Q9NQC3 1192 aaKnown RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ASAP1Q9ULH1 1129 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PAPPAQ13219 1627 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 MED23Q9ULK4 1368 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 COL14A1Q05707 1796 aaKnown RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 GOLIM4O00461 696 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 GJB2P29033 226 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 DDX46Q7L014 1031 aaKnown RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 UBR2Q8IWV8 1755 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 LETM1O95202 739 aaPredicted RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PLA2G12BQ9BX93 195 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ALDH8A1Q9H2A2 487 aaPredicted RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 SH3TC1Q8TE82 1336 aa6.06□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 A0A1B0GUL7 405 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ANKRD18BA2A2Z9 1011 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TAF5LO75529 589 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CCDC173Q0VFZ6 552 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TSGA10IPQ3SY00 556 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ATG9AQ7Z3C6 839 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PIAS4Q8N2W9 510 aaPredicted RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 NEK1Q96PY6 1258 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 KIF3AQ9Y496 699 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 RNF113AO15541 343 aaKnown RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZFYP08048 801 aaPredicted RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CPA1P15085 419 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ADRA2BP18089 450 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ADCK5Q3MIX3 580 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 GIGYF2Q6Y7W6 1299 aaKnown RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.05□□□□□ -1.443e-6■□□□□ 8.5
DNAAF4-CCPG1-201ENST00000565113 CNNM1Q9NRU3 951 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 THRAP3Q9Y2W1 955 aaKnown RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 F13A1P00488 732 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZNF594Q96JF6 807 aaPredicted RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 LARP6Q9BRS8 491 aaKnown RBP6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CTNNA3Q9UI47 895 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 CDHR2Q9BYE9 1310 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 PALLDQ8WX93 1383 aa6.05□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 VPS37CA5D8V6 355 aaPredicted RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 SYT1P21579 422 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TIMM10P62072 90 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FOXD4L6Q3SYB3 417 aaPredicted RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 LRRC24Q50LG9 513 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FOXD4L3Q6VB84 417 aaPredicted RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 ZNF589Q86UQ0 364 aaPredicted RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 EDC3Q96F86 508 aaKnown RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 DSCC1Q9BVC3 393 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 TRMT112Q9UI30 125 aaKnown RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 RPAP1Q9BWH6 1393 aaPredicted RBP6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 WASHC4Q2M389 1173 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 USPL1Q5W0Q7 1092 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 FAM89AQ96GI7 184 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 GLI3P10071 1580 aa6.04□□□□□ -1.44
DNAAF4-CCPG1-201ENST00000565113 NUP188Q5SRE5 1749 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms