RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 DDX60Q8IY21 1712 aaKnown RBP21.68■■□□□ 1.06
CCNF-203ENST00000564236 DUOX1Q9NRD9 1551 aa21.67■■□□□ 1.06
CCNF-203ENST00000564236 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
CCNF-203ENST00000564236 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
CCNF-203ENST00000564236 CDHR2Q9BYE9 1310 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 TMEM88BA6NKF7 163 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 ATP5J2-PTCD1G3V325 749 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 LMOD1P29536 600 aaPredicted RBP21.66■■□□□ 1.06
CCNF-203ENST00000564236 USP50Q70EL3 339 aaPredicted RBP21.66■■□□□ 1.06
CCNF-203ENST00000564236 CNTROBQ8N137 903 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 C8orf58Q8NAV2 365 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 GJA3Q9Y6H8 435 aa21.66■■□□□ 1.06
CCNF-203ENST00000564236 EPS15P42566 896 aa21.65■■□□□ 1.06
CCNF-203ENST00000564236 CXCL9Q07325 125 aa21.65■■□□□ 1.06
CCNF-203ENST00000564236 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
CCNF-203ENST00000564236 ZBTB38Q8NAP3 1195 aaPredicted RBP21.65■■□□□ 1.06
CCNF-203ENST00000564236 PHAXQ9H814 394 aaKnown RBP21.65■■□□□ 1.06
CCNF-203ENST00000564236 CCDC184Q52MB2 194 aa21.64■■□□□ 1.05
CCNF-203ENST00000564236 GPRC5DQ9NZD1 345 aa21.64■■□□□ 1.05
CCNF-203ENST00000564236 CLEC11AQ9Y240 323 aa21.64■■□□□ 1.05
CCNF-203ENST00000564236 IRS4O14654 1257 aaPredicted RBP21.63■■□□□ 1.05
CCNF-203ENST00000564236 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
CCNF-203ENST00000564236 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
CCNF-203ENST00000564236 CCDC30Q5VVM6 783 aa21.63■■□□□ 1.05
CCNF-203ENST00000564236 MAP1SQ66K74 1059 aaPredicted RBP21.63■■□□□ 1.05
CCNF-203ENST00000564236 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
CCNF-203ENST00000564236 CCDC191Q8NCU4 936 aa21.63■■□□□ 1.05
CCNF-203ENST00000564236 CELF1Q92879 486 aaKnown RBP21.63■■□□□ 1.05
CCNF-203ENST00000564236 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
CCNF-203ENST00000564236 ZEB1P37275 1124 aaPredicted RBP21.62■■□□□ 1.05
CCNF-203ENST00000564236 MKRN1Q9UHC7 482 aaKnown RBP21.62■■□□□ 1.05
CCNF-203ENST00000564236 IL16Q14005 1332 aa21.61■■□□□ 1.05
CCNF-203ENST00000564236 RASSF10A6NK89 507 aa21.61■■□□□ 1.05
CCNF-203ENST00000564236 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
CCNF-203ENST00000564236 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
CCNF-203ENST00000564236 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
CCNF-203ENST00000564236 ADARB2Q9NS39 739 aaKnown RBP21.61■■□□□ 1.05
CCNF-203ENST00000564236 PCCAP05165 728 aaPredicted RBP21.6■■□□□ 1.05
CCNF-203ENST00000564236 CIAPIN1Q6FI81 312 aa21.6■■□□□ 1.05
CCNF-203ENST00000564236 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
CCNF-203ENST00000564236 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
CCNF-203ENST00000564236 COL4A1P02462 1669 aa21.6■■□□□ 1.05
CCNF-203ENST00000564236 YDJCA8MPS7 323 aa21.59■■□□□ 1.05
CCNF-203ENST00000564236 DDX58O95786 925 aaKnown RBP21.59■■□□□ 1.05
CCNF-203ENST00000564236 TNIP1Q15025 636 aa21.59■■□□□ 1.05
CCNF-203ENST00000564236 PGAP2Q9UHJ9 254 aa21.59■■□□□ 1.05
CCNF-203ENST00000564236 RPS8P62241 208 aaKnown RBP21.58■■□□□ 1.05
CCNF-203ENST00000564236 ZNF428Q96B54 188 aa21.58■■□□□ 1.05
CCNF-203ENST00000564236 MYD88Q99836 296 aa21.58■■□□□ 1.05
CCNF-203ENST00000564236 PODXL2Q9NZ53 605 aa21.58■■□□□ 1.05
CCNF-203ENST00000564236 GMPSP49915 693 aaPredicted RBP21.57■■□□□ 1.04
CCNF-203ENST00000564236 CWC25Q9NXE8 425 aaPredicted RBP21.57■■□□□ 1.04
CCNF-203ENST00000564236 PDE8AO60658 829 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 VEGFBP49765 207 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
CCNF-203ENST00000564236 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 ZC3H15Q8WU90 426 aaKnown RBP21.56■■□□□ 1.04
CCNF-203ENST00000564236 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
CCNF-203ENST00000564236 TAF1P21675 1872 aa21.56■■□□□ 1.04
CCNF-203ENST00000564236 GPSM2P81274 684 aa21.55■■□□□ 1.04
CCNF-203ENST00000564236 CCDC152Q4G0S7 254 aa21.55■■□□□ 1.04
CCNF-203ENST00000564236 DPF2Q92785 391 aa21.55■■□□□ 1.04
CCNF-203ENST00000564236 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
CCNF-203ENST00000564236 RAD17O75943 681 aa21.54■■□□□ 1.04
CCNF-203ENST00000564236 EYA3Q99504 573 aa21.54■■□□□ 1.04
CCNF-203ENST00000564236 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
CCNF-203ENST00000564236 IGKV5-2P06315 115 aa21.53■■□□□ 1.04
CCNF-203ENST00000564236 DEFB115Q30KQ5 88 aa21.53■■□□□ 1.04
CCNF-203ENST00000564236 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
CCNF-203ENST00000564236 TBC1D16Q8TBP0 767 aa21.53■■□□□ 1.04
CCNF-203ENST00000564236 SEC31BQ9NQW1 1179 aa21.53■■□□□ 1.04
CCNF-203ENST00000564236 PI4KAP2A4QPH2 592 aa21.52■■□□□ 1.04
CCNF-203ENST00000564236 CST9Q5W186 159 aa21.52■■□□□ 1.04
CCNF-203ENST00000564236 PI4KAP1Q8N8J0 262 aa21.52■■□□□ 1.04
CCNF-203ENST00000564236 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
CCNF-203ENST00000564236 RTL9Q8NET4 1388 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 RPS12P25398 132 aaKnown RBP21.51■■□□□ 1.03
CCNF-203ENST00000564236 HIRAP54198 1017 aaPredicted RBP21.51■■□□□ 1.03
CCNF-203ENST00000564236 BCL2L13Q9BXK5 485 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 WBP1LQ9NX94 342 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 CNOT7Q9UIV1 285 aaKnown RBP21.51■■□□□ 1.03
CCNF-203ENST00000564236 ZNF609O15014 1411 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 THSD7BQ9C0I4 1608 aa21.51■■□□□ 1.03
CCNF-203ENST00000564236 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
CCNF-203ENST00000564236 C6orf229H3BNL8 230 aa21.5■■□□□ 1.03
CCNF-203ENST00000564236 PSMD14O00487 310 aa21.5■■□□□ 1.03
CCNF-203ENST00000564236 WDR63Q8IWG1 891 aa21.5■■□□□ 1.03
CCNF-203ENST00000564236 ANP32CO43423 234 aa21.49■■□□□ 1.03
CCNF-203ENST00000564236 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.03
CCNF-203ENST00000564236 TRPM4Q8TD43 1214 aa21.49■■□□□ 1.03
CCNF-203ENST00000564236 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
CCNF-203ENST00000564236 TLL2Q9Y6L7 1015 aa21.49■■□□□ 1.03
CCNF-203ENST00000564236 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
CCNF-203ENST00000564236 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 H7C1D1 291 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 TRAF5O00463 557 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 FOXN1O15353 648 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms