RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 IGKV5-2P06315 115 aa25.33■■□□□ 1.65
CMTM3-207ENST00000564060 IARSP41252 1262 aaKnown RBP25.33■■□□□ 1.65
CMTM3-207ENST00000564060 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
CMTM3-207ENST00000564060 ZNF277Q9NRM2 450 aaPredicted RBP25.33■■□□□ 1.65
CMTM3-207ENST00000564060 NEURL1BA8MQ27 555 aa25.32■■□□□ 1.64
CMTM3-207ENST00000564060 PDE8AO60658 829 aa25.32■■□□□ 1.64
CMTM3-207ENST00000564060 SP8Q8IXZ3 490 aa25.32■■□□□ 1.64
CMTM3-207ENST00000564060 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
CMTM3-207ENST00000564060 SUPT20HQ8NEM7 779 aa25.31■■□□□ 1.64
CMTM3-207ENST00000564060 TOMM70O94826 608 aa25.3■■□□□ 1.64
CMTM3-207ENST00000564060 CWF19L2Q2TBE0 894 aaKnown RBP25.3■■□□□ 1.64
CMTM3-207ENST00000564060 CCDC152Q4G0S7 254 aa25.3■■□□□ 1.64
CMTM3-207ENST00000564060 MIER1Q8N108 512 aa25.3■■□□□ 1.64
CMTM3-207ENST00000564060 LINS1Q8NG48 757 aa25.3■■□□□ 1.64
CMTM3-207ENST00000564060 JDP2Q8WYK2 163 aa25.3■■□□□ 1.64
CMTM3-207ENST00000564060 SCN4AP35499 1836 aa25.29■■□□□ 1.64
CMTM3-207ENST00000564060 VPS33BQ9H267 617 aa25.29■■□□□ 1.64
CMTM3-207ENST00000564060 RRAGCQ9HB90 399 aa25.29■■□□□ 1.64
CMTM3-207ENST00000564060 VEGFAP15692 232 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-207ENST00000564060 DPP8Q6V1X1 898 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-207ENST00000564060 MPNDQ8N594 471 aa25.27■■□□□ 1.64
CMTM3-207ENST00000564060 GCKRQ14397 625 aa25.26■■□□□ 1.63
CMTM3-207ENST00000564060 CT47B1P0C2W7 299 aaPredicted RBP25.25■■□□□ 1.63
CMTM3-207ENST00000564060 LARGE2Q8N3Y3 721 aa25.25■■□□□ 1.63
CMTM3-207ENST00000564060 CELF1Q92879 486 aaKnown RBP25.25■■□□□ 1.63
CMTM3-207ENST00000564060 RTFDC1Q9BY42 306 aaPredicted RBP25.25■■□□□ 1.63
CMTM3-207ENST00000564060 SPEF2Q9C093 1822 aa25.24■■□□□ 1.63
CMTM3-207ENST00000564060 H7C1W4 665 aa25.24■■□□□ 1.63
CMTM3-207ENST00000564060 CTSWP56202 376 aa25.24■■□□□ 1.63
CMTM3-207ENST00000564060 RPS8P62241 208 aaKnown RBP25.24■■□□□ 1.63
CMTM3-207ENST00000564060 UBE3BQ7Z3V4 1068 aa25.24■■□□□ 1.63
CMTM3-207ENST00000564060 RBM46Q8TBY0 533 aaKnown RBP25.24■■□□□ 1.63
CMTM3-207ENST00000564060 JARID2Q92833 1246 aaPredicted RBP25.24■■□□□ 1.63
CMTM3-207ENST00000564060 CDCA7LQ96GN5 454 aa25.24■■□□□ 1.63
CMTM3-207ENST00000564060 FZD9O00144 591 aa25.23■■□□□ 1.63
CMTM3-207ENST00000564060 PPIP5K2O43314 1243 aa25.23■■□□□ 1.63
CMTM3-207ENST00000564060 TRMT2AQ8IZ69 625 aaKnown RBP25.23■■□□□ 1.63
CMTM3-207ENST00000564060 F6X3S4 739 aa25.22■■□□□ 1.63
CMTM3-207ENST00000564060 EIF6P56537 245 aaKnown RBP25.22■■□□□ 1.63
CMTM3-207ENST00000564060 NIM1KQ8IY84 436 aa25.22■■□□□ 1.63
CMTM3-207ENST00000564060 CDC5LQ99459 802 aaKnown RBP25.22■■□□□ 1.63
CMTM3-207ENST00000564060 LTBP1Q14766 1721 aa25.22■■□□□ 1.63
CMTM3-207ENST00000564060 RTL9Q8NET4 1388 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 PTPRCP08575 1304 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 IQCA1LA6NCM1 817 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 DDNO94850 711 aaPredicted RBP25.21■■□□□ 1.63
CMTM3-207ENST00000564060 ALDH1L2Q3SY69 923 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 BEND3Q5T5X7 828 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 PLA2G12BQ9BX93 195 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 DUOX1Q9NRD9 1551 aa25.21■■□□□ 1.63
CMTM3-207ENST00000564060 COL4A1P02462 1669 aa25.2■■□□□ 1.63
CMTM3-207ENST00000564060 SLC51AQ86UW1 340 aa25.2■■□□□ 1.62
CMTM3-207ENST00000564060 ANKRD18AQ8IVF6 992 aa25.2■■□□□ 1.62
CMTM3-207ENST00000564060 MRPL50Q8N5N7 158 aaKnown RBP25.2■■□□□ 1.62
CMTM3-207ENST00000564060 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.62
CMTM3-207ENST00000564060 COL4A5P29400 1685 aa25.2■■□□□ 1.62
CMTM3-207ENST00000564060 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
CMTM3-207ENST00000564060 AOC3Q16853 763 aa25.19■■□□□ 1.62
CMTM3-207ENST00000564060 GPC2Q8N158 579 aa25.19■■□□□ 1.62
CMTM3-207ENST00000564060 TTLL11Q8NHH1 800 aa25.19■■□□□ 1.62
CMTM3-207ENST00000564060 L3MBTL3Q96JM7 780 aaPredicted RBP25.19■■□□□ 1.62
CMTM3-207ENST00000564060 NSFL1CQ9UNZ2 370 aaKnown RBP25.19■■□□□ 1.62
CMTM3-207ENST00000564060 ALDH1L1O75891 902 aa25.18■■□□□ 1.62
CMTM3-207ENST00000564060 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
CMTM3-207ENST00000564060 FSTL1Q12841 308 aa25.18■■□□□ 1.62
CMTM3-207ENST00000564060 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
CMTM3-207ENST00000564060 SSH1Q8WYL5 1049 aa25.18■■□□□ 1.62
CMTM3-207ENST00000564060 CCDC85AQ96PX6 553 aaPredicted RBP25.18■■□□□ 1.62
CMTM3-207ENST00000564060 CASP7P55210 303 aa25.17■■□□□ 1.62
CMTM3-207ENST00000564060 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
CMTM3-207ENST00000564060 SMC1BQ8NDV3 1235 aa25.16■■□□□ 1.62
CMTM3-207ENST00000564060 EYA3Q99504 573 aa25.16■■□□□ 1.62
CMTM3-207ENST00000564060 POTECB2RU33 542 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 GRM8O00222 908 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 HSPA6P17066 643 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 GREM2Q9H772 168 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 SMC4Q9NTJ3 1288 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 PODXL2Q9NZ53 605 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 C9orf78Q9NZ63 289 aaPredicted RBP25.15■■□□□ 1.62
CMTM3-207ENST00000564060 ZNRF3Q9ULT6 936 aa25.15■■□□□ 1.62
CMTM3-207ENST00000564060 C6orf229H3BNL8 230 aa25.14■■□□□ 1.62
CMTM3-207ENST00000564060 GPSM2P81274 684 aa25.14■■□□□ 1.62
CMTM3-207ENST00000564060 HNRNPUQ00839 825 aaKnown RBP eCLIP25.14■■□□□ 1.62
CMTM3-207ENST00000564060 WASHC4Q2M389 1173 aa25.14■■□□□ 1.62
CMTM3-207ENST00000564060 ANKIB1Q9P2G1 1089 aa25.14■■□□□ 1.62
CMTM3-207ENST00000564060 HACL1Q9UJ83 578 aa25.13■■□□□ 1.61
CMTM3-207ENST00000564060 IGHMBP2P38935 993 aaKnown RBP25.12■■□□□ 1.61
CMTM3-207ENST00000564060 BCL2L13Q9BXK5 485 aa25.12■■□□□ 1.61
CMTM3-207ENST00000564060 BSDC1Q9NW68 430 aaPredicted RBP25.12■■□□□ 1.61
CMTM3-207ENST00000564060 GJA3Q9Y6H8 435 aa25.12■■□□□ 1.61
CMTM3-207ENST00000564060 XDHP47989 1333 aa25.12■■□□□ 1.61
CMTM3-207ENST00000564060 CSF1RP07333 972 aa25.11■■□□□ 1.61
CMTM3-207ENST00000564060 LMOD1P29536 600 aaPredicted RBP25.11■■□□□ 1.61
CMTM3-207ENST00000564060 TBC1D16Q8TBP0 767 aa25.11■■□□□ 1.61
CMTM3-207ENST00000564060 GGA1Q9UJY5 639 aa25.11■■□□□ 1.61
CMTM3-207ENST00000564060 ITGA6P23229 1130 aa25.1■■□□□ 1.61
CMTM3-207ENST00000564060 FAM161AQ3B820 660 aa25.1■■□□□ 1.61
CMTM3-207ENST00000564060 POLLQ9UGP5 575 aa25.1■■□□□ 1.61
CMTM3-207ENST00000564060 UFL1O94874 794 aa25.09■■□□□ 1.61
CMTM3-207ENST00000564060 MPHOSPH8Q99549 860 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms