RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CHL1O00533 1208 aa27.23■■□□□ 1.95
HERC2-204ENST00000563945 GRM1Q13255 1194 aa27.23■■□□□ 1.95
HERC2-204ENST00000563945 GRAPQ13588 217 aa27.23■■□□□ 1.95
HERC2-204ENST00000563945 GRAPLQ8TC17 118 aaPredicted RBP27.23■■□□□ 1.95
HERC2-204ENST00000563945 RUNDC1Q96C34 613 aa27.23■■□□□ 1.95
HERC2-204ENST00000563945 DDX10Q13206 875 aaKnown RBP27.22■■□□□ 1.95
HERC2-204ENST00000563945 HDGFL1Q5TGJ6 251 aa27.22■■□□□ 1.95
HERC2-204ENST00000563945 TMC4Q7Z404 712 aa27.22■■□□□ 1.95
HERC2-204ENST00000563945 GMPSP49915 693 aaPredicted RBP27.21■■□□□ 1.95
HERC2-204ENST00000563945 KIAA2012Q0VF49 1180 aa27.21■■□□□ 1.95
HERC2-204ENST00000563945 CHPF2Q9P2E5 772 aa27.21■■□□□ 1.95
HERC2-204ENST00000563945 TRAF5O00463 557 aa27.2■■□□□ 1.94
HERC2-204ENST00000563945 FMR1Q06787 632 aaKnown RBP eCLIP27.2■■□□□ 1.94
HERC2-204ENST00000563945 KRT24Q2M2I5 525 aa27.2■■□□□ 1.94
HERC2-204ENST00000563945 ANKRD13DQ6ZTN6 518 aa27.2■■□□□ 1.94
HERC2-204ENST00000563945 CAPNS2Q96L46 248 aa27.2■■□□□ 1.94
HERC2-204ENST00000563945 RAD17O75943 681 aa27.19■■□□□ 1.94
HERC2-204ENST00000563945 PLBD2Q8NHP8 589 aa27.19■■□□□ 1.94
HERC2-204ENST00000563945 DBF4Q9UBU7 674 aaPredicted RBP27.19■■□□□ 1.94
HERC2-204ENST00000563945 LTBP1Q14766 1721 aa27.19■■□□□ 1.94
HERC2-204ENST00000563945 ZNF428Q96B54 188 aa27.18■■□□□ 1.94
HERC2-204ENST00000563945 GPR101Q96P66 508 aaPredicted RBP27.18■■□□□ 1.94
HERC2-204ENST00000563945 HOXB7P09629 217 aa27.17■■□□□ 1.94
HERC2-204ENST00000563945 CYP4F22Q6NT55 531 aa27.17■■□□□ 1.94
HERC2-204ENST00000563945 CDHR2Q9BYE9 1310 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 H7C1D1 291 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 HSPA8P11142 646 aaKnown RBP27.16■■□□□ 1.94
HERC2-204ENST00000563945 CST9Q5W186 159 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 HYPKQ9NX55 129 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 TRIM35Q9UPQ4 493 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 TLL2Q9Y6L7 1015 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 ANKRD36CQ5JPF3 1778 aa27.16■■□□□ 1.94
HERC2-204ENST00000563945 FAM89AQ96GI7 184 aa27.15■■□□□ 1.94
HERC2-204ENST00000563945 NSFL1CQ9UNZ2 370 aaKnown RBP27.15■■□□□ 1.94
HERC2-204ENST00000563945 ATP5J2-PTCD1G3V325 749 aa27.14■■□□□ 1.94
HERC2-204ENST00000563945 CELF2O95319 508 aaKnown RBP27.14■■□□□ 1.94
HERC2-204ENST00000563945 WASHC4Q2M389 1173 aa27.14■■□□□ 1.94
HERC2-204ENST00000563945 ZC3H15Q8WU90 426 aaKnown RBP27.14■■□□□ 1.94
HERC2-204ENST00000563945 CNOT7Q9UIV1 285 aaKnown RBP27.14■■□□□ 1.94
HERC2-204ENST00000563945 ZNF408Q9H9D4 720 aa27.13■■□□□ 1.93
HERC2-204ENST00000563945 ADAMTS8Q9UP79 889 aa27.13■■□□□ 1.93
HERC2-204ENST00000563945 C6orf229H3BNL8 230 aa27.12■■□□□ 1.93
HERC2-204ENST00000563945 RTL5Q5HYW3 569 aaPredicted RBP27.12■■□□□ 1.93
HERC2-204ENST00000563945 DUSP27Q5VZP5 1158 aa27.12■■□□□ 1.93
HERC2-204ENST00000563945 CDC37L1Q7L3B6 337 aa27.12■■□□□ 1.93
HERC2-204ENST00000563945 CFAP44Q96MT7 982 aa27.12■■□□□ 1.93
HERC2-204ENST00000563945 ISCA1Q9BUE6 129 aa27.12■■□□□ 1.93
HERC2-204ENST00000563945 GLIS2Q9BZE0 524 aaPredicted RBP27.12■■□□□ 1.93
HERC2-204ENST00000563945 TRPM7Q96QT4 1865 aa27.11■■□□□ 1.93
HERC2-204ENST00000563945 MAP2K2P36507 400 aa27.11■■□□□ 1.93
HERC2-204ENST00000563945 SF3B3Q15393 1217 aaKnown RBP27.11■■□□□ 1.93
HERC2-204ENST00000563945 LAMB2P55268 1798 aa27.11■■□□□ 1.93
HERC2-204ENST00000563945 HSP90B1P14625 803 aaKnown RBP27.1■■□□□ 1.93
HERC2-204ENST00000563945 RIC3Q7Z5B4 369 aa27.1■■□□□ 1.93
HERC2-204ENST00000563945 EYA3Q99504 573 aa27.1■■□□□ 1.93
HERC2-204ENST00000563945 PGAP2Q9UHJ9 254 aa27.1■■□□□ 1.93
HERC2-204ENST00000563945 RIMBP2O15034 1052 aa27.09■■□□□ 1.93
HERC2-204ENST00000563945 IRS4O14654 1257 aaPredicted RBP27.08■■□□□ 1.93
HERC2-204ENST00000563945 GOLGA2Q08379 1002 aa27.08■■□□□ 1.93
HERC2-204ENST00000563945 SAPCD2Q86UD0 394 aa27.08■■□□□ 1.93
HERC2-204ENST00000563945 MICALL2Q8IY33 904 aa27.08■■□□□ 1.93
HERC2-204ENST00000563945 CELF1Q92879 486 aaKnown RBP27.08■■□□□ 1.93
HERC2-204ENST00000563945 YDJCA8MPS7 323 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 G3V3G9 751 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 HIRAP54198 1017 aaPredicted RBP27.07■■□□□ 1.92
HERC2-204ENST00000563945 CALD1Q05682 793 aaKnown RBP27.07■■□□□ 1.92
HERC2-204ENST00000563945 TRIM28Q13263 835 aaKnown RBP27.07■■□□□ 1.92
HERC2-204ENST00000563945 DCAF8Q5TAQ9 597 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 TRPM4Q8TD43 1214 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 DPF2Q92785 391 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 DBNDD1Q9H9R9 158 aa27.07■■□□□ 1.92
HERC2-204ENST00000563945 AOC2O75106 756 aa27.06■■□□□ 1.92
HERC2-204ENST00000563945 RPS8P62241 208 aaKnown RBP27.06■■□□□ 1.92
HERC2-204ENST00000563945 HHIPL1Q96JK4 782 aa27.06■■□□□ 1.92
HERC2-204ENST00000563945 MBIPQ9NS73 344 aa27.06■■□□□ 1.92
HERC2-204ENST00000563945 ZBTB12Q9Y330 459 aaPredicted RBP27.06■■□□□ 1.92
HERC2-204ENST00000563945 PSMD14O00487 310 aa27.05■■□□□ 1.92
HERC2-204ENST00000563945 USP48Q86UV5 1035 aa27.05■■□□□ 1.92
HERC2-204ENST00000563945 ABHD8Q96I13 439 aa27.05■■□□□ 1.92
HERC2-204ENST00000563945 TAF1P21675 1872 aa27.04■■□□□ 1.92
HERC2-204ENST00000563945 GPSM2P81274 684 aa27.04■■□□□ 1.92
HERC2-204ENST00000563945 CHMP4AQ9BY43 222 aa27.04■■□□□ 1.92
HERC2-204ENST00000563945 ZC3H12CQ9C0D7 883 aaKnown RBP27.04■■□□□ 1.92
HERC2-204ENST00000563945 CA12O43570 354 aa27.03■■□□□ 1.92
HERC2-204ENST00000563945 RPS12P25398 132 aaKnown RBP27.03■■□□□ 1.92
HERC2-204ENST00000563945 GNAI1P63096 354 aa27.03■■□□□ 1.92
HERC2-204ENST00000563945 POLLQ9UGP5 575 aa27.03■■□□□ 1.92
HERC2-204ENST00000563945 ELL2O00472 640 aaPredicted RBP27.02■■□□□ 1.92
HERC2-204ENST00000563945 ECE2O60344 883 aa27.02■■□□□ 1.92
HERC2-204ENST00000563945 DOK7Q18PE1 504 aa27.02■■□□□ 1.92
HERC2-204ENST00000563945 RBM26Q5T8P6 1007 aaKnown RBP27.02■■□□□ 1.92
HERC2-204ENST00000563945 ZBTB38Q8NAP3 1195 aaPredicted RBP27.02■■□□□ 1.92
HERC2-204ENST00000563945 SHTN1A0MZ66 631 aa27.01■■□□□ 1.91
HERC2-204ENST00000563945 TBC1D10BQ4KMP7 808 aaPredicted RBP27.01■■□□□ 1.91
HERC2-204ENST00000563945 SAMD7Q7Z3H4 446 aa27.01■■□□□ 1.91
HERC2-204ENST00000563945 DCPSQ96C86 337 aaKnown RBP27.01■■□□□ 1.91
HERC2-204ENST00000563945 IFT57Q9NWB7 429 aa27.01■■□□□ 1.91
HERC2-204ENST00000563945 ANKIB1Q9P2G1 1089 aa27.01■■□□□ 1.91
HERC2-204ENST00000563945 TBC1D16Q8TBP0 767 aa27■■□□□ 1.91
HERC2-204ENST00000563945 MYD88Q99836 296 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms