RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PLA2G12BQ9BX93 195 aa18.66■□□□□ 0.58
SCAMP2-203ENST00000563663 LTBP1Q14766 1721 aa18.66■□□□□ 0.58
SCAMP2-203ENST00000563663 CNKSR1Q969H4 720 aa18.65■□□□□ 0.58
SCAMP2-203ENST00000563663 CRAMP1Q96RY5 1269 aa18.65■□□□□ 0.58
SCAMP2-203ENST00000563663 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
SCAMP2-203ENST00000563663 GRM8O00222 908 aa18.65■□□□□ 0.58
SCAMP2-203ENST00000563663 KAZALD1Q96I82 304 aa18.65■□□□□ 0.58
SCAMP2-203ENST00000563663 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
SCAMP2-203ENST00000563663 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
SCAMP2-203ENST00000563663 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 PDE8AO60658 829 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 NBPF7P0C2Y1 421 aaPredicted RBP18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 PRELPP51888 382 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 SPEF2Q9C093 1822 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 CTSWP56202 376 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
SCAMP2-203ENST00000563663 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
SCAMP2-203ENST00000563663 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
SCAMP2-203ENST00000563663 NFKBIEO00221 500 aa18.62■□□□□ 0.57
SCAMP2-203ENST00000563663 FOXO4P98177 505 aa18.62■□□□□ 0.57
SCAMP2-203ENST00000563663 RPGRQ92834 1020 aaKnown RBP18.62■□□□□ 0.57
SCAMP2-203ENST00000563663 C21orf2O43822 256 aa18.61■□□□□ 0.57
SCAMP2-203ENST00000563663 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
SCAMP2-203ENST00000563663 CSF1RP07333 972 aa18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 RLBP1P12271 317 aa18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 ALDH1B1P30837 517 aa18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 RBM17Q96I25 401 aaKnown RBP18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 SEC31BQ9NQW1 1179 aa18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 DICER1Q9UPY3 1922 aaKnown RBP18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
SCAMP2-203ENST00000563663 CCT4P50991 539 aaKnown RBP18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 GRAPQ13588 217 aa18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 FRAT1Q92837 279 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 SUCLG2Q96I99 432 aa18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 GREM2Q9H772 168 aa18.59■□□□□ 0.57
SCAMP2-203ENST00000563663 IPO8O15397 1037 aaKnown RBP18.58■□□□□ 0.56
SCAMP2-203ENST00000563663 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.56
SCAMP2-203ENST00000563663 COL4A5P29400 1685 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 RASSF7Q02833 373 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 CCDC152Q4G0S7 254 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 ATP6V0A2Q9Y487 856 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
SCAMP2-203ENST00000563663 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
SCAMP2-203ENST00000563663 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
SCAMP2-203ENST00000563663 MEIS3Q99687 375 aa18.56■□□□□ 0.56
SCAMP2-203ENST00000563663 BBOX1O75936 387 aa18.55■□□□□ 0.56
SCAMP2-203ENST00000563663 ARHGAP27Q6ZUM4 889 aa18.55■□□□□ 0.56
SCAMP2-203ENST00000563663 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
SCAMP2-203ENST00000563663 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
SCAMP2-203ENST00000563663 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
SCAMP2-203ENST00000563663 RPS8P62241 208 aaKnown RBP18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 SOGA3Q5TF21 947 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 LMBR1LQ6UX01 489 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 PLIN1O60240 522 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 ITGA6P23229 1130 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
SCAMP2-203ENST00000563663 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.55
SCAMP2-203ENST00000563663 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.55
SCAMP2-203ENST00000563663 PANK1Q8TE04 598 aa18.52■□□□□ 0.55
SCAMP2-203ENST00000563663 TAOK3Q9H2K8 898 aa18.52■□□□□ 0.55
SCAMP2-203ENST00000563663 TMC4Q7Z404 712 aa18.51■□□□□ 0.55
SCAMP2-203ENST00000563663 PSMD1Q99460 953 aa18.51■□□□□ 0.55
SCAMP2-203ENST00000563663 FKBP4Q02790 459 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCAMP2-203ENST00000563663 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
SCAMP2-203ENST00000563663 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
SCAMP2-203ENST00000563663 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
SCAMP2-203ENST00000563663 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
SCAMP2-203ENST00000563663 CDC5LQ99459 802 aaKnown RBP18.49■□□□□ 0.55
SCAMP2-203ENST00000563663 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 LMNB1P20700 586 aa18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 C9orf131Q5VYM1 1079 aa18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 BSDC1Q9NW68 430 aaPredicted RBP18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
SCAMP2-203ENST00000563663 ZBTB7BO15156 539 aaPredicted RBP18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 GPSM2P81274 684 aa18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 ZNF277Q9NRM2 450 aaPredicted RBP18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 WTIPA6NIX2 430 aaPredicted RBP18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 GRIPAP1Q4V328 841 aa18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 FTSJ3Q8IY81 847 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 ZNF594Q96JF6 807 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms