RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 FBF1Q8TES7 1133 aa9.31□□□□□ -0.92
CHD9-205ENST00000562785 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
CHD9-205ENST00000562785 MRRFQ96E11 262 aaKnown RBP9.31□□□□□ -0.92
CHD9-205ENST00000562785 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
CHD9-205ENST00000562785 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
CHD9-205ENST00000562785 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
CHD9-205ENST00000562785 POTECB2RU33 542 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 CCINQ13939 588 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 FAM182BQ5T319 152 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 CFHR5Q9BXR6 569 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 ABI2Q9NYB9 513 aaPredicted RBP9.3□□□□□ -0.92
CHD9-205ENST00000562785 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 PHF24Q9UPV7 400 aa9.3□□□□□ -0.92
CHD9-205ENST00000562785 PHACTR2O75167 634 aa9.29□□□□□ -0.92
CHD9-205ENST00000562785 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
CHD9-205ENST00000562785 CHRDQ9H2X0 955 aa9.29□□□□□ -0.92
CHD9-205ENST00000562785 EFCC1Q9HA90 598 aa9.29□□□□□ -0.92
CHD9-205ENST00000562785 CDC14CA4D256 554 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 CD33P20138 364 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 FGFR3P22607 806 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 VAMP1P23763 118 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 GRIN2CQ14957 1233 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 DUSP9Q99956 384 aaKnown RBP9.28□□□□□ -0.92
CHD9-205ENST00000562785 ZFYVE28Q9HCC9 887 aa9.28□□□□□ -0.92
CHD9-205ENST00000562785 SASH3O75995 380 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 SV2AQ7L0J3 742 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 SLC30A3Q99726 388 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 CNTN3Q9P232 1028 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 ZFATQ9P243 1243 aa9.27□□□□□ -0.93
CHD9-205ENST00000562785 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
CHD9-205ENST00000562785 TARSP26639 723 aaKnown RBP9.26□□□□□ -0.93
CHD9-205ENST00000562785 TTC39BQ5VTQ0 682 aaPredicted RBP9.26□□□□□ -0.93
CHD9-205ENST00000562785 USPL1Q5W0Q7 1092 aa9.26□□□□□ -0.93
CHD9-205ENST00000562785 KRT25Q7Z3Z0 450 aa9.26□□□□□ -0.93
CHD9-205ENST00000562785 C1orf127Q8N9H9 656 aa9.26□□□□□ -0.93
CHD9-205ENST00000562785 PARP2Q9UGN5 583 aa9.26□□□□□ -0.93
CHD9-205ENST00000562785 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.26□□□□□ -0.93
CHD9-205ENST00000562785 GPR25O00155 361 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 MAP3K6O95382 1288 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 RARAP10276 462 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 NFKB1P19838 968 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 MRPL58Q14197 206 aaKnown RBP9.25□□□□□ -0.93
CHD9-205ENST00000562785 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 PMEPA1Q969W9 287 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 PNMA5Q96PV4 448 aa9.25□□□□□ -0.93
CHD9-205ENST00000562785 EREGO14944 169 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 MMP20O60882 483 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 GNA15P30679 374 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 VEGFBP49765 207 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 DAB2P98082 770 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
CHD9-205ENST00000562785 TMC4Q7Z404 712 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 NPAS3Q8IXF0 933 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 CCDC74AQ96AQ1 378 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 RNF19AQ9NV58 838 aa9.24□□□□□ -0.93
CHD9-205ENST00000562785 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
CHD9-205ENST00000562785 HOXD8P13378 290 aaPredicted RBP9.23□□□□□ -0.93
CHD9-205ENST00000562785 SOX18P35713 384 aa9.23□□□□□ -0.93
CHD9-205ENST00000562785 GALNT12Q8IXK2 581 aa9.23□□□□□ -0.93
CHD9-205ENST00000562785 BHMTQ93088 406 aa9.23□□□□□ -0.93
CHD9-205ENST00000562785 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
CHD9-205ENST00000562785 CES1P23141 567 aa9.22□□□□□ -0.93
CHD9-205ENST00000562785 ITGAEP38570 1179 aa9.22□□□□□ -0.93
CHD9-205ENST00000562785 CTBSQ01459 385 aa9.22□□□□□ -0.93
CHD9-205ENST00000562785 NEUROD1Q13562 356 aa9.22□□□□□ -0.93
CHD9-205ENST00000562785 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
CHD9-205ENST00000562785 FRMD6Q96NE9 622 aa9.22□□□□□ -0.93
CHD9-205ENST00000562785 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
CHD9-205ENST00000562785 H3BM21 787 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 RECKO95980 971 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 PSMD2Q13200 908 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 FAM161BQ96MY7 647 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
CHD9-205ENST00000562785 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 KIF4AO95239 1232 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
CHD9-205ENST00000562785 PSAPP07602 524 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 IRS1P35568 1242 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 GAS6Q14393 721 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHD9-205ENST00000562785 ZNF468Q5VIY5 522 aaPredicted RBP9.2□□□□□ -0.94
CHD9-205ENST00000562785 EPS8L3Q8TE67 593 aaKnown RBP9.2□□□□□ -0.94
CHD9-205ENST00000562785 KANSL3Q9P2N6 904 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
CHD9-205ENST00000562785 C2CD2LO14523 706 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 SORBS3O60504 671 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 PLAURQ03405 335 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 PI16Q6UXB8 463 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 DHX32Q7L7V1 743 aaKnown RBP9.19□□□□□ -0.94
CHD9-205ENST00000562785 MRS2Q9HD23 443 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
CHD9-205ENST00000562785 NLRP2Q9NX02 1062 aa9.19□□□□□ -0.94
CHD9-205ENST00000562785 SALL4Q9UJQ4 1053 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms