RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RIC3Q7Z5B4 369 aa21.25■□□□□ 0.99
CDT1-202ENST00000562747 CNTROBQ8N137 903 aa21.25■□□□□ 0.99
CDT1-202ENST00000562747 THSD7BQ9C0I4 1608 aa21.25■□□□□ 0.99
CDT1-202ENST00000562747 PNMA8AQ86V59 439 aaPredicted RBP21.24■□□□□ 0.99
CDT1-202ENST00000562747 NLRP10Q86W26 655 aa21.24■□□□□ 0.99
CDT1-202ENST00000562747 JDP2Q8WYK2 163 aa21.24■□□□□ 0.99
CDT1-202ENST00000562747 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
CDT1-202ENST00000562747 UTP14AQ9BVJ6 771 aaKnown RBP21.24■□□□□ 0.99
CDT1-202ENST00000562747 RASSF10A6NK89 507 aa21.23■□□□□ 0.99
CDT1-202ENST00000562747 ISCA1Q9BUE6 129 aa21.23■□□□□ 0.99
CDT1-202ENST00000562747 GJA3Q9Y6H8 435 aa21.23■□□□□ 0.99
CDT1-202ENST00000562747 CACNA1FO60840 1977 aa21.23■□□□□ 0.99
CDT1-202ENST00000562747 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
CDT1-202ENST00000562747 PPEF1O14829 653 aaPredicted RBP21.22■□□□□ 0.99
CDT1-202ENST00000562747 SLC4A2P04920 1241 aa21.22■□□□□ 0.99
CDT1-202ENST00000562747 SCNN1DP51172 638 aa21.22■□□□□ 0.99
CDT1-202ENST00000562747 FMR1Q06787 632 aaKnown RBP eCLIP21.22■□□□□ 0.99
CDT1-202ENST00000562747 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
CDT1-202ENST00000562747 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
CDT1-202ENST00000562747 EIF6P56537 245 aaKnown RBP21.21■□□□□ 0.99
CDT1-202ENST00000562747 TRIM28Q13263 835 aaKnown RBP21.21■□□□□ 0.99
CDT1-202ENST00000562747 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
CDT1-202ENST00000562747 PRDM10Q9NQV6 1147 aa21.21■□□□□ 0.99
CDT1-202ENST00000562747 WBP1LQ9NX94 342 aa21.21■□□□□ 0.99
CDT1-202ENST00000562747 EPS15P42566 896 aa21.2■□□□□ 0.98
CDT1-202ENST00000562747 SLC10A5Q5PT55 438 aa21.2■□□□□ 0.98
CDT1-202ENST00000562747 LARGE2Q8N3Y3 721 aa21.2■□□□□ 0.98
CDT1-202ENST00000562747 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
CDT1-202ENST00000562747 TRPM7Q96QT4 1865 aa21.2■□□□□ 0.98
CDT1-202ENST00000562747 CTCFP49711 727 aaPredicted RBP21.19■□□□□ 0.98
CDT1-202ENST00000562747 KSR2Q6VAB6 950 aa21.19■□□□□ 0.98
CDT1-202ENST00000562747 AIDAQ96BJ3 306 aa21.19■□□□□ 0.98
CDT1-202ENST00000562747 TRMT112Q9UI30 125 aaKnown RBP21.19■□□□□ 0.98
CDT1-202ENST00000562747 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
CDT1-202ENST00000562747 DEFB115Q30KQ5 88 aa21.18■□□□□ 0.98
CDT1-202ENST00000562747 G2E3Q7L622 706 aa21.18■□□□□ 0.98
CDT1-202ENST00000562747 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
CDT1-202ENST00000562747 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
CDT1-202ENST00000562747 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 LMOD1P29536 600 aaPredicted RBP21.17■□□□□ 0.98
CDT1-202ENST00000562747 LBX1P52954 281 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 FLIIQ13045 1269 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 AOC3Q16853 763 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 TRMT2AQ8IZ69 625 aaKnown RBP21.17■□□□□ 0.98
CDT1-202ENST00000562747 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 CDCA7LQ96GN5 454 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 NLRP3Q96P20 1036 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 MYD88Q99836 296 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 ABT1Q9ULW3 272 aaKnown RBP21.17■□□□□ 0.98
CDT1-202ENST00000562747 MAP3K2Q9Y2U5 619 aa21.17■□□□□ 0.98
CDT1-202ENST00000562747 WDR33Q9C0J8 1336 aaKnown RBP21.17■□□□□ 0.98
CDT1-202ENST00000562747 ABCC4O15439 1325 aa21.16■□□□□ 0.98
CDT1-202ENST00000562747 TAF1P21675 1872 aa21.15■□□□□ 0.98
CDT1-202ENST00000562747 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
CDT1-202ENST00000562747 HSPA8P11142 646 aaKnown RBP21.15■□□□□ 0.98
CDT1-202ENST00000562747 GRIPAP1Q4V328 841 aa21.15■□□□□ 0.98
CDT1-202ENST00000562747 NIM1KQ8IY84 436 aa21.15■□□□□ 0.98
CDT1-202ENST00000562747 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
CDT1-202ENST00000562747 TRAF5O00463 557 aa21.14■□□□□ 0.97
CDT1-202ENST00000562747 FKBP5Q13451 457 aaPredicted RBP21.14■□□□□ 0.97
CDT1-202ENST00000562747 ZNF428Q96B54 188 aa21.14■□□□□ 0.97
CDT1-202ENST00000562747 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.97
CDT1-202ENST00000562747 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.97
CDT1-202ENST00000562747 LRRC37AA6NMS7 1700 aa21.13■□□□□ 0.97
CDT1-202ENST00000562747 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
CDT1-202ENST00000562747 DDX60Q8IY21 1712 aaKnown RBP21.12■□□□□ 0.97
CDT1-202ENST00000562747 HCLS1P14317 486 aaPredicted RBP21.12■□□□□ 0.97
CDT1-202ENST00000562747 CST9Q5W186 159 aa21.12■□□□□ 0.97
CDT1-202ENST00000562747 USP50Q70EL3 339 aaPredicted RBP21.12■□□□□ 0.97
CDT1-202ENST00000562747 ZBTB38Q8NAP3 1195 aaPredicted RBP21.12■□□□□ 0.97
CDT1-202ENST00000562747 FAM89AQ96GI7 184 aa21.12■□□□□ 0.97
CDT1-202ENST00000562747 CWC25Q9NXE8 425 aaPredicted RBP21.12■□□□□ 0.97
CDT1-202ENST00000562747 COL4A1P02462 1669 aa21.12■□□□□ 0.97
CDT1-202ENST00000562747 CT47B1P0C2W7 299 aaPredicted RBP21.11■□□□□ 0.97
CDT1-202ENST00000562747 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
CDT1-202ENST00000562747 DNAAF4Q8WXU2 420 aa21.11■□□□□ 0.97
CDT1-202ENST00000562747 RTFDC1Q9BY42 306 aaPredicted RBP21.11■□□□□ 0.97
CDT1-202ENST00000562747 GPRC5DQ9NZD1 345 aa21.11■□□□□ 0.97
CDT1-202ENST00000562747 PCCAP05165 728 aaPredicted RBP21.1■□□□□ 0.97
CDT1-202ENST00000562747 IGKV5-2P06315 115 aa21.1■□□□□ 0.97
CDT1-202ENST00000562747 HSP90B1P14625 803 aaKnown RBP21.1■□□□□ 0.97
CDT1-202ENST00000562747 CXCL9Q07325 125 aa21.1■□□□□ 0.97
CDT1-202ENST00000562747 CYP4F22Q6NT55 531 aa21.1■□□□□ 0.97
CDT1-202ENST00000562747 CAPNS2Q96L46 248 aa21.1■□□□□ 0.97
CDT1-202ENST00000562747 MAP2K1Q02750 393 aaPredicted RBP21.09■□□□□ 0.97
CDT1-202ENST00000562747 NEURL1BA8MQ27 555 aa21.08■□□□□ 0.97
CDT1-202ENST00000562747 IRS4O14654 1257 aaPredicted RBP21.08■□□□□ 0.97
CDT1-202ENST00000562747 GMPSP49915 693 aaPredicted RBP21.08■□□□□ 0.97
CDT1-202ENST00000562747 GRM1Q13255 1194 aa21.08■□□□□ 0.97
CDT1-202ENST00000562747 PAXIP1Q6ZW49 1069 aaPredicted RBP21.08■□□□□ 0.97
CDT1-202ENST00000562747 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
CDT1-202ENST00000562747 ZNRF3Q9ULT6 936 aa21.08■□□□□ 0.97
CDT1-202ENST00000562747 TLL2Q9Y6L7 1015 aa21.08■□□□□ 0.97
CDT1-202ENST00000562747 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
CDT1-202ENST00000562747 ALDH1L2Q3SY69 923 aa21.07■□□□□ 0.96
CDT1-202ENST00000562747 RTL5Q5HYW3 569 aaPredicted RBP21.07■□□□□ 0.96
CDT1-202ENST00000562747 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
CDT1-202ENST00000562747 VPS33BQ9H267 617 aa21.07■□□□□ 0.96
CDT1-202ENST00000562747 KIAA2012Q0VF49 1180 aa21.06■□□□□ 0.96
CDT1-202ENST00000562747 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms