RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
RABGGTA-219ENST00000560871 HSPA6P17066 643 aa19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 CASP7P55210 303 aa19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 SF3B3Q15393 1217 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 COL4A1P02462 1669 aa19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 ABCC4O15439 1325 aa19.7■□□□□ 0.74
RABGGTA-219ENST00000560871 H7C1W4 665 aa19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 FKBP4Q02790 459 aaKnown RBP eCLIP19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 RTKN2Q8IZC4 609 aa19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 RBM46Q8TBY0 533 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 CRAMP1Q96RY5 1269 aa19.69■□□□□ 0.74
RABGGTA-219ENST00000560871 DPY19L2Q6NUT2 758 aa19.68■□□□□ 0.74
RABGGTA-219ENST00000560871 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-219ENST00000560871 RBM17Q96I25 401 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-219ENST00000560871 KIF16BQ96L93 1317 aa19.68■□□□□ 0.74
RABGGTA-219ENST00000560871 PDE8AO60658 829 aa19.67■□□□□ 0.74
RABGGTA-219ENST00000560871 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
RABGGTA-219ENST00000560871 SLC4A10Q6U841 1118 aa19.67■□□□□ 0.74
RABGGTA-219ENST00000560871 NOB1Q9ULX3 412 aaKnown RBP19.67■□□□□ 0.74
RABGGTA-219ENST00000560871 LRRC37AA6NMS7 1700 aa19.67■□□□□ 0.74
RABGGTA-219ENST00000560871 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 CC2D2BQ6DHV5 1058 aa19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 UBE3BQ7Z3V4 1068 aa19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 SLC51AQ86UW1 340 aa19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
RABGGTA-219ENST00000560871 POTECB2RU33 542 aa19.65■□□□□ 0.74
RABGGTA-219ENST00000560871 BCAR3O75815 825 aa19.65■□□□□ 0.74
RABGGTA-219ENST00000560871 PLA2G12BQ9BX93 195 aa19.65■□□□□ 0.74
RABGGTA-219ENST00000560871 MYH3P11055 1940 aa19.64■□□□□ 0.74
RABGGTA-219ENST00000560871 GRM8O00222 908 aa19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 PPEF1O14829 653 aaPredicted RBP19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 CTSWP56202 376 aa19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 GRAPQ13588 217 aa19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 PSMD1Q99460 953 aa19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
RABGGTA-219ENST00000560871 TAF1P21675 1872 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 RTL9Q8NET4 1388 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 UTYO14607 1347 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 FSTL1Q12841 308 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 GRIPAP1Q4V328 841 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 ARHGAP45Q92619 1136 aa19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 API5Q9BZZ5 524 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-219ENST00000560871 DDNO94850 711 aaPredicted RBP19.62■□□□□ 0.73
RABGGTA-219ENST00000560871 IARSP41252 1262 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-219ENST00000560871 CELF1Q92879 486 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-219ENST00000560871 SCN4AP35499 1836 aa19.61■□□□□ 0.73
RABGGTA-219ENST00000560871 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
RABGGTA-219ENST00000560871 TTLL11Q8NHH1 800 aa19.61■□□□□ 0.73
RABGGTA-219ENST00000560871 TRIM27P14373 513 aa19.6■□□□□ 0.73
RABGGTA-219ENST00000560871 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
RABGGTA-219ENST00000560871 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
RABGGTA-219ENST00000560871 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
RABGGTA-219ENST00000560871 LTBP1Q14766 1721 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 BBOX1O75936 387 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 CSF1RP07333 972 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 APLP1P51693 650 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 SMC1BQ8NDV3 1235 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 GREM2Q9H772 168 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 TNNQ9UQP3 1299 aa19.59■□□□□ 0.73
RABGGTA-219ENST00000560871 FZD9O00144 591 aa19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 NBPF7P0C2Y1 421 aaPredicted RBP19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 FOXO4P98177 505 aa19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 ATF7IPQ6VMQ6 1270 aa19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 TMC4Q7Z404 712 aa19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 COL4A5P29400 1685 aa19.58■□□□□ 0.72
RABGGTA-219ENST00000560871 ZNF541Q9H0D2 1346 aa19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 SP8Q8IXZ3 490 aa19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 FRAT1Q92837 279 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 KAZALD1Q96I82 304 aa19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 SUCLG2Q96I99 432 aa19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 L3MBTL3Q96JM7 780 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-219ENST00000560871 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-219ENST00000560871 FAM161AQ3B820 660 aa19.56■□□□□ 0.72
RABGGTA-219ENST00000560871 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-219ENST00000560871 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-219ENST00000560871 USP44Q9H0E7 712 aa19.56■□□□□ 0.72
RABGGTA-219ENST00000560871 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
RABGGTA-219ENST00000560871 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
RABGGTA-219ENST00000560871 JDP2Q8WYK2 163 aa19.55■□□□□ 0.72
RABGGTA-219ENST00000560871 RTFDC1Q9BY42 306 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-219ENST00000560871 TMX4Q9H1E5 349 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-219ENST00000560871 SPEF2Q9C093 1822 aa19.54■□□□□ 0.72
RABGGTA-219ENST00000560871 CDC5LQ99459 802 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-219ENST00000560871 VPS33BQ9H267 617 aa19.54■□□□□ 0.72
RABGGTA-219ENST00000560871 ITGA6P23229 1130 aa19.53■□□□□ 0.72
RABGGTA-219ENST00000560871 RABL6Q3YEC7 729 aaPredicted RBP19.53■□□□□ 0.72
RABGGTA-219ENST00000560871 DNAJC5GQ8N7S2 189 aa19.53■□□□□ 0.72
RABGGTA-219ENST00000560871 IQCA1LA6NCM1 817 aa19.52■□□□□ 0.72
RABGGTA-219ENST00000560871 LMBR1LQ6UX01 489 aa19.52■□□□□ 0.72
RABGGTA-219ENST00000560871 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
RABGGTA-219ENST00000560871 GPC2Q8N158 579 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms