RNA–Protein interactions for RNA: ENST00000560335.5

NUMB-232, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-232ENST00000560335 SASH1O94885 1247 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 AIMP1Q12904 312 aaKnown RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 NECTIN1Q15223 517 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 DDB1Q16531 1140 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 CAVIN1Q6NZI2 390 aaKnown RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 LRSAM1Q6UWE0 723 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 RUFY3Q7L099 469 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 MARCH10Q8NA82 808 aaPredicted RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 DDX54Q8TDD1 881 aaKnown RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 MYD88Q99836 296 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.04
NUMB-232ENST00000560335 PDRG1Q9NUG6 133 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 SMC3Q9UQE7 1217 aa8.52□□□□□ -1.04
NUMB-232ENST00000560335 RPAP1Q9BWH6 1393 aaPredicted RBP8.52□□□□□ -1.05
NUMB-232ENST00000560335 MED23Q9ULK4 1368 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 SBF2Q86WG5 1849 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 STX6O43752 255 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 CASTP20810 708 aaKnown RBP8.52□□□□□ -1.05
NUMB-232ENST00000560335 AK2P54819 239 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 PKP1Q13835 747 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 KRT27Q7Z3Y8 459 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.52□□□□□ -1.05
NUMB-232ENST00000560335 EAF2Q96CJ1 260 aaPredicted RBP8.52□□□□□ -1.05
NUMB-232ENST00000560335 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
NUMB-232ENST00000560335 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
NUMB-232ENST00000560335 ESPNB1AK53 854 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 EXOC5O00471 708 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
NUMB-232ENST00000560335 ZSCAN22P10073 491 aaPredicted RBP8.51□□□□□ -1.05
NUMB-232ENST00000560335 MCM5P33992 734 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 KCNJ4P48050 445 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 GAS2L3Q86XJ1 694 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 CCDC191Q8NCU4 936 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 PANK2Q9BZ23 570 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 IL25Q9H293 177 aa8.51□□□□□ -1.05
NUMB-232ENST00000560335 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
NUMB-232ENST00000560335 TNS2Q63HR2 1409 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 CIAO1O76071 339 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 MAP4K4O95819 1239 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 MYL6BP14649 208 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 IL15P40933 162 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 RFX5P48382 616 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 UBE2HP62256 183 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 UVSSAQ2YD98 709 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 TNNI3KQ59H18 835 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 USPL1Q5W0Q7 1092 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 CREB3L3Q68CJ9 461 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 BLOC1S2Q6QNY1 142 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 PTF1AQ7RTS3 328 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 RASEFQ8IZ41 740 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 VSIG10Q8N0Z9 540 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 GPT2Q8TD30 523 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 JAKMIP1Q96N16 626 aaKnown RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 CDCA7Q9BWT1 371 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 CWC25Q9NXE8 425 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 RBM8AQ9Y5S9 174 aaKnown RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
NUMB-232ENST00000560335 FPGT-TNNI3KV9GXZ4 949 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 PAPPAQ13219 1627 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 ABCC12Q96J65 1359 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 ARFGEF2Q9Y6D5 1785 aa8.5□□□□□ -1.05
NUMB-232ENST00000560335 SPEF2Q9C093 1822 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 A0A087WZG4 1122 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 H7C1W4 665 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 F13A1P00488 732 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 CASP7P55210 303 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 TRIM28Q13263 835 aaKnown RBP8.49□□□□□ -1.05
NUMB-232ENST00000560335 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
NUMB-232ENST00000560335 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 HAUS7Q99871 368 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 KIF3AQ9Y496 699 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 SH3TC1Q8TE82 1336 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
NUMB-232ENST00000560335 DOT1LQ8TEK3 1739 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 SLC27A2O14975 620 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 SYT1P21579 422 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 CCDC183Q5T5S1 534 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 ZSCAN30Q86W11 494 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 RTN4Q9NQC3 1192 aaKnown RBP8.48□□□□□ -1.05
NUMB-232ENST00000560335 HELLSQ9NRZ9 838 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 ELP1O95163 1332 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 ITGB4P16144 1822 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 AFDNP55196 1824 aaKnown RBP8.48□□□□□ -1.05
NUMB-232ENST00000560335 KCNQ2O43526 872 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 PTH1RQ03431 593 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 MCMDC2Q4G0Z9 681 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 KBTBD3Q8NAB2 608 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 PLA2G12BQ9BX93 195 aa8.48□□□□□ -1.05
NUMB-232ENST00000560335 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
NUMB-232ENST00000560335 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms