RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 DDX60Q8IY21 1712 aaKnown RBP22.1■■□□□ 1.13
AC105339.3-201ENST00000560043 DNAAF4Q8WXU2 420 aa22.1■■□□□ 1.13
AC105339.3-201ENST00000560043 JARID2Q92833 1246 aaPredicted RBP22.1■■□□□ 1.13
AC105339.3-201ENST00000560043 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
AC105339.3-201ENST00000560043 NEURL1BA8MQ27 555 aa22.09■■□□□ 1.13
AC105339.3-201ENST00000560043 PDE8AO60658 829 aa22.09■■□□□ 1.13
AC105339.3-201ENST00000560043 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
AC105339.3-201ENST00000560043 JDP2Q8WYK2 163 aa22.09■■□□□ 1.13
AC105339.3-201ENST00000560043 CDHR2Q9BYE9 1310 aa22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 SLFN5Q08AF3 891 aa22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 CWF19L2Q2TBE0 894 aaKnown RBP22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 MPNDQ8N594 471 aa22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 SUPT20HQ8NEM7 779 aa22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
AC105339.3-201ENST00000560043 DDNO94850 711 aaPredicted RBP22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 CCDC152Q4G0S7 254 aa22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 DPP8Q6V1X1 898 aaPredicted RBP22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 LARGE2Q8N3Y3 721 aa22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 CELF1Q92879 486 aaKnown RBP22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 VPS33BQ9H267 617 aa22.07■■□□□ 1.12
AC105339.3-201ENST00000560043 MIER1Q8N108 512 aa22.06■■□□□ 1.12
AC105339.3-201ENST00000560043 LINS1Q8NG48 757 aa22.06■■□□□ 1.12
AC105339.3-201ENST00000560043 RTFDC1Q9BY42 306 aaPredicted RBP22.06■■□□□ 1.12
AC105339.3-201ENST00000560043 H7C1W4 665 aa22.05■■□□□ 1.12
AC105339.3-201ENST00000560043 FZD9O00144 591 aa22.05■■□□□ 1.12
AC105339.3-201ENST00000560043 RPS8P62241 208 aaKnown RBP22.05■■□□□ 1.12
AC105339.3-201ENST00000560043 GCKRQ14397 625 aa22.05■■□□□ 1.12
AC105339.3-201ENST00000560043 POTECB2RU33 542 aa22.04■■□□□ 1.12
AC105339.3-201ENST00000560043 PPIP5K2O43314 1243 aa22.04■■□□□ 1.12
AC105339.3-201ENST00000560043 F6X3S4 739 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 CTSWP56202 376 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 EIF6P56537 245 aaKnown RBP22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 CDCA7LQ96GN5 454 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 ZNF541Q9H0D2 1346 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
AC105339.3-201ENST00000560043 HSPA6P17066 643 aa22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 FSTL1Q12841 308 aa22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 AOC3Q16853 763 aa22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 NIM1KQ8IY84 436 aa22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 CCDC85AQ96PX6 553 aaPredicted RBP22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 TAF1P21675 1872 aa22.02■■□□□ 1.12
AC105339.3-201ENST00000560043 L3MBTL3Q96JM7 780 aaPredicted RBP22.01■■□□□ 1.11
AC105339.3-201ENST00000560043 IQCA1LA6NCM1 817 aa22■■□□□ 1.11
AC105339.3-201ENST00000560043 BEND3Q5T5X7 828 aa22■■□□□ 1.11
AC105339.3-201ENST00000560043 TRMT2AQ8IZ69 625 aaKnown RBP22■■□□□ 1.11
AC105339.3-201ENST00000560043 SMC1BQ8NDV3 1235 aa22■■□□□ 1.11
AC105339.3-201ENST00000560043 TTLL11Q8NHH1 800 aa22■■□□□ 1.11
AC105339.3-201ENST00000560043 NSFL1CQ9UNZ2 370 aaKnown RBP22■■□□□ 1.11
AC105339.3-201ENST00000560043 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 ANKRD18AQ8IVF6 992 aa21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 GPC2Q8N158 579 aa21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 MRPL50Q8N5N7 158 aaKnown RBP21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 CDC5LQ99459 802 aaKnown RBP21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 PLA2G12BQ9BX93 195 aa21.99■■□□□ 1.11
AC105339.3-201ENST00000560043 COL4A5P29400 1685 aa21.98■■□□□ 1.11
AC105339.3-201ENST00000560043 GPSM2P81274 684 aa21.98■■□□□ 1.11
AC105339.3-201ENST00000560043 CASP7P55210 303 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 SLC4A10Q6U841 1118 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 SSH1Q8WYL5 1049 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 ZNRF3Q9ULT6 936 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 GJA3Q9Y6H8 435 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 LRRC37AA6NMS7 1700 aa21.97■■□□□ 1.11
AC105339.3-201ENST00000560043 COL4A1P02462 1669 aa21.96■■□□□ 1.11
AC105339.3-201ENST00000560043 C6orf229H3BNL8 230 aa21.96■■□□□ 1.11
AC105339.3-201ENST00000560043 GREM2Q9H772 168 aa21.96■■□□□ 1.11
AC105339.3-201ENST00000560043 HACL1Q9UJ83 578 aa21.96■■□□□ 1.11
AC105339.3-201ENST00000560043 RTL9Q8NET4 1388 aa21.96■■□□□ 1.11
AC105339.3-201ENST00000560043 ALDH1L1O75891 902 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 WASHC4Q2M389 1173 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 EYA3Q99504 573 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 SRCIN1Q9C0H9 1055 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 ANKIB1Q9P2G1 1089 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 POLLQ9UGP5 575 aa21.95■■□□□ 1.1
AC105339.3-201ENST00000560043 PODXL2Q9NZ53 605 aa21.94■■□□□ 1.1
AC105339.3-201ENST00000560043 PTPRCP08575 1304 aa21.94■■□□□ 1.1
AC105339.3-201ENST00000560043 CSF1RP07333 972 aa21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 APLP1P51693 650 aa21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 TBC1D16Q8TBP0 767 aa21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 DUOX1Q9NRD9 1551 aa21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 BSDC1Q9NW68 430 aaPredicted RBP21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
AC105339.3-201ENST00000560043 GRM8O00222 908 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 RIMBP2O15034 1052 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 LMOD1P29536 600 aaPredicted RBP21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 EPHX2P34913 555 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 CXCL9Q07325 125 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 SMC4Q9NTJ3 1288 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 GGA1Q9UJY5 639 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 MYH3P11055 1940 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 SCN4AP35499 1836 aa21.92■■□□□ 1.1
AC105339.3-201ENST00000560043 UFL1O94874 794 aa21.91■■□□□ 1.1
AC105339.3-201ENST00000560043 ITGA6P23229 1130 aa21.91■■□□□ 1.1
AC105339.3-201ENST00000560043 IGHMBP2P38935 993 aaKnown RBP21.91■■□□□ 1.1
AC105339.3-201ENST00000560043 TNIP1Q15025 636 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms