RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 NLRP3Q96P20 1036 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 UTP14AQ9BVJ6 771 aaKnown RBP7.61□□□□□ -1.19
USP3-212ENST00000559276 PNNQ9H307 717 aaKnown RBP7.61□□□□□ -1.19
USP3-212ENST00000559276 DDX21Q9NR30 783 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP3-212ENST00000559276 CLEC11AQ9Y240 323 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 WDR33Q9C0J8 1336 aaKnown RBP7.6□□□□□ -1.19
USP3-212ENST00000559276 YDJCA8MPS7 323 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 TRAF5O00463 557 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 PPIP5K2O43314 1243 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 HIRAP54198 1017 aaPredicted RBP7.6□□□□□ -1.19
USP3-212ENST00000559276 EIF6P56537 245 aaKnown RBP7.6□□□□□ -1.19
USP3-212ENST00000559276 AIMP1Q12904 312 aaKnown RBP7.6□□□□□ -1.19
USP3-212ENST00000559276 DEFB115Q30KQ5 88 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 SP8Q8IXZ3 490 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 ISCA1Q9BUE6 129 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 GPRC5DQ9NZD1 345 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 CHPF2Q9P2E5 772 aa7.6□□□□□ -1.19
USP3-212ENST00000559276 MYBBP1AQ9BQG0 1328 aaKnown RBP7.59□□□□□ -1.19
USP3-212ENST00000559276 SHTN1A0MZ66 631 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 BBOX1O75936 387 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 HSPA8P11142 646 aaKnown RBP7.59□□□□□ -1.19
USP3-212ENST00000559276 GMPSP49915 693 aaPredicted RBP7.59□□□□□ -1.19
USP3-212ENST00000559276 KIAA2012Q0VF49 1180 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 USP50Q70EL3 339 aaPredicted RBP7.59□□□□□ -1.19
USP3-212ENST00000559276 NIM1KQ8IY84 436 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 VPS33BQ9H267 617 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 PGAP2Q9UHJ9 254 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 ADAMTS8Q9UP79 889 aa7.59□□□□□ -1.19
USP3-212ENST00000559276 SH3TC1Q8TE82 1336 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 ZBTB22O15209 634 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 ZNF853P0CG23 659 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 CTCFP49711 727 aaPredicted RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 LBX1P52954 281 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 LMOD3Q0VAK6 560 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 GRAPQ13588 217 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 DLK2Q6UY11 383 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 DPP8Q6V1X1 898 aaPredicted RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 MPNDQ8N594 471 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 PLBD2Q8NHP8 589 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 GRAPLQ8TC17 118 aaPredicted RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 CELF1Q92879 486 aaKnown RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 RUNDC1Q96C34 613 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
USP3-212ENST00000559276 SCN9AQ15858 1988 aa7.58□□□□□ -1.2
USP3-212ENST00000559276 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 RAD17O75943 681 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 EGFRP00533 1210 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 HOXB7P09629 217 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 SF3B3Q15393 1217 aaKnown RBP7.57□□□□□ -1.2
USP3-212ENST00000559276 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 FAM89AQ96GI7 184 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 CAPNS2Q96L46 248 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 GLIS2Q9BZE0 524 aaPredicted RBP7.57□□□□□ -1.2
USP3-212ENST00000559276 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
USP3-212ENST00000559276 MBIPQ9NS73 344 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 ABT1Q9ULW3 272 aaKnown RBP7.57□□□□□ -1.2
USP3-212ENST00000559276 TLL2Q9Y6L7 1015 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 RTL9Q8NET4 1388 aa7.57□□□□□ -1.2
USP3-212ENST00000559276 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
USP3-212ENST00000559276 AOC2O75106 756 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 CIAPIN1Q6FI81 312 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 SAPCD2Q86UD0 394 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 SUPT20HQ8NEM7 779 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 PRKRIP1Q9H875 184 aaPredicted RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
USP3-212ENST00000559276 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
USP3-212ENST00000559276 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 POLR2AP24928 1970 aaKnown RBP7.55□□□□□ -1.2
USP3-212ENST00000559276 PSME4Q14997 1843 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 GPSM2P81274 684 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
USP3-212ENST00000559276 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 GPR101Q96P66 508 aaPredicted RBP7.55□□□□□ -1.2
USP3-212ENST00000559276 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 DBNDD1Q9H9R9 158 aa7.55□□□□□ -1.2
USP3-212ENST00000559276 CNOT7Q9UIV1 285 aaKnown RBP7.55□□□□□ -1.2
USP3-212ENST00000559276 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
USP3-212ENST00000559276 PSMD14O00487 310 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 APAF1O14727 1248 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
USP3-212ENST00000559276 PLCB2Q00722 1185 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 MAP2K1Q02750 393 aaPredicted RBP7.54□□□□□ -1.2
USP3-212ENST00000559276 TNIP1Q15025 636 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms