RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
RABGGTA-206ENST00000558649 H7C1W4 665 aa20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 GRAPQ13588 217 aa20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 TAOK3Q9H2K8 898 aa20.09■□□□□ 0.81
RABGGTA-206ENST00000558649 CTSWP56202 376 aa20.08■□□□□ 0.81
RABGGTA-206ENST00000558649 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
RABGGTA-206ENST00000558649 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-206ENST00000558649 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 BCAR3O75815 825 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 LMNB1P20700 586 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 PRELPP51888 382 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 TMX4Q9H1E5 349 aaPredicted RBP20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 SEC31BQ9NQW1 1179 aa20.07■□□□□ 0.8
RABGGTA-206ENST00000558649 GRM8O00222 908 aa20.06■□□□□ 0.8
RABGGTA-206ENST00000558649 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
RABGGTA-206ENST00000558649 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
RABGGTA-206ENST00000558649 LRRC37AA6NMS7 1700 aa20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 BBOX1O75936 387 aa20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 CASP7P55210 303 aa20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 FKBP4Q02790 459 aaKnown RBP eCLIP20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 ZNF784Q8NCA9 323 aaPredicted RBP20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 ATP6V0A2Q9Y487 856 aa20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 DICER1Q9UPY3 1922 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-206ENST00000558649 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
RABGGTA-206ENST00000558649 TTLL11Q8NHH1 800 aa20.04■□□□□ 0.8
RABGGTA-206ENST00000558649 API5Q9BZZ5 524 aaKnown RBP20.04■□□□□ 0.8
RABGGTA-206ENST00000558649 ZNF277Q9NRM2 450 aaPredicted RBP20.04■□□□□ 0.8
RABGGTA-206ENST00000558649 LTBP3Q9NS15 1303 aa20.03■□□□□ 0.8
RABGGTA-206ENST00000558649 SNED1Q8TER0 1413 aa20.03■□□□□ 0.8
RABGGTA-206ENST00000558649 CC2D2BQ6DHV5 1058 aa20.03■□□□□ 0.8
RABGGTA-206ENST00000558649 GREM2Q9H772 168 aa20.03■□□□□ 0.8
RABGGTA-206ENST00000558649 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
RABGGTA-206ENST00000558649 SP8Q8IXZ3 490 aa20.02■□□□□ 0.8
RABGGTA-206ENST00000558649 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.8
RABGGTA-206ENST00000558649 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
RABGGTA-206ENST00000558649 RPS8P62241 208 aaKnown RBP20.01■□□□□ 0.79
RABGGTA-206ENST00000558649 FAM161AQ3B820 660 aa20.01■□□□□ 0.79
RABGGTA-206ENST00000558649 TMC4Q7Z404 712 aa20.01■□□□□ 0.79
RABGGTA-206ENST00000558649 IPO8O15397 1037 aaKnown RBP20■□□□□ 0.79
RABGGTA-206ENST00000558649 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
RABGGTA-206ENST00000558649 ANKRD18AQ8IVF6 992 aa20■□□□□ 0.79
RABGGTA-206ENST00000558649 CDC5LQ99459 802 aaKnown RBP20■□□□□ 0.79
RABGGTA-206ENST00000558649 PSMD1Q99460 953 aa20■□□□□ 0.79
RABGGTA-206ENST00000558649 TNNQ9UQP3 1299 aa20■□□□□ 0.79
RABGGTA-206ENST00000558649 ITGA6P23229 1130 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 IARSP41252 1262 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 CCT4P50991 539 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 FOXO4P98177 505 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 MPNDQ8N594 471 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 SUCLG2Q96I99 432 aa19.99■□□□□ 0.79
RABGGTA-206ENST00000558649 RTL9Q8NET4 1388 aa19.98■□□□□ 0.79
RABGGTA-206ENST00000558649 TRIM27P14373 513 aa19.98■□□□□ 0.79
RABGGTA-206ENST00000558649 LMBR1LQ6UX01 489 aa19.98■□□□□ 0.79
RABGGTA-206ENST00000558649 ATF7IPQ6VMQ6 1270 aa19.98■□□□□ 0.79
RABGGTA-206ENST00000558649 DUOX1Q9NRD9 1551 aa19.98■□□□□ 0.79
RABGGTA-206ENST00000558649 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
RABGGTA-206ENST00000558649 NSFL1CQ9UNZ2 370 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-206ENST00000558649 UTYO14607 1347 aa19.97■□□□□ 0.79
RABGGTA-206ENST00000558649 LTBP1Q14766 1721 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 CSF1RP07333 972 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 GPSM2P81274 684 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 AOC3Q16853 763 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 USP44Q9H0E7 712 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 COL4A5P29400 1685 aa19.96■□□□□ 0.79
RABGGTA-206ENST00000558649 ANKRD18BA2A2Z9 1011 aa19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 PPIP5K2O43314 1243 aa19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 IGHMBP2P38935 993 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 IFIT5Q13325 482 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 SUPT20HQ8NEM7 779 aa19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 BICC1Q9H694 974 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 ANKIB1Q9P2G1 1089 aa19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 ZC3H4Q9UPT8 1303 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-206ENST00000558649 C6orf229H3BNL8 230 aa19.94■□□□□ 0.78
RABGGTA-206ENST00000558649 JDP2Q8WYK2 163 aa19.94■□□□□ 0.78
RABGGTA-206ENST00000558649 KAZALD1Q96I82 304 aa19.94■□□□□ 0.78
RABGGTA-206ENST00000558649 MPHOSPH8Q99549 860 aa19.94■□□□□ 0.78
RABGGTA-206ENST00000558649 UBTFL1P0CB47 393 aaPredicted RBP19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 CCDC57Q2TAC2 916 aa19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 TAF7LQ5H9L4 462 aa19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 GPR101Q96P66 508 aaPredicted RBP19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 RTFDC1Q9BY42 306 aaPredicted RBP19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
RABGGTA-206ENST00000558649 UFL1O94874 794 aa19.92■□□□□ 0.78
RABGGTA-206ENST00000558649 INTS3Q68E01 1043 aaKnown RBP19.92■□□□□ 0.78
RABGGTA-206ENST00000558649 ZNF594Q96JF6 807 aaPredicted RBP19.92■□□□□ 0.78
RABGGTA-206ENST00000558649 BSDC1Q9NW68 430 aaPredicted RBP19.92■□□□□ 0.78
RABGGTA-206ENST00000558649 RCAN3Q9UKA8 241 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms