RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 BEND3Q5T5X7 828 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 ZNF784Q8NCA9 323 aaPredicted RBP11.35□□□□□ -0.59
SPG11-207ENST00000558138 API5Q9BZZ5 524 aaKnown RBP11.35□□□□□ -0.59
SPG11-207ENST00000558138 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
SPG11-207ENST00000558138 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
SPG11-207ENST00000558138 NFKBIEO00221 500 aa11.34□□□□□ -0.59
SPG11-207ENST00000558138 ALDH1L1O75891 902 aa11.34□□□□□ -0.59
SPG11-207ENST00000558138 BBOX1O75936 387 aa11.34□□□□□ -0.59
SPG11-207ENST00000558138 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
SPG11-207ENST00000558138 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
SPG11-207ENST00000558138 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
SPG11-207ENST00000558138 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
SPG11-207ENST00000558138 CDC5LQ99459 802 aaKnown RBP11.34□□□□□ -0.59
SPG11-207ENST00000558138 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
SPG11-207ENST00000558138 H7C1W4 665 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 GRM8O00222 908 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 IPO8O15397 1037 aaKnown RBP11.33□□□□□ -0.6
SPG11-207ENST00000558138 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
SPG11-207ENST00000558138 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 TMC4Q7Z404 712 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 MPNDQ8N594 471 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
SPG11-207ENST00000558138 SEC31BQ9NQW1 1179 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
SPG11-207ENST00000558138 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 UTRNP46939 3433 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
SPG11-207ENST00000558138 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
SPG11-207ENST00000558138 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 MYH3P11055 1940 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 KDM2BQ8NHM5 1336 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 LTBP3Q9NS15 1303 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
SPG11-207ENST00000558138 ANKRD18BA2A2Z9 1011 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 G3V3G9 751 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 C6orf229H3BNL8 230 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 PPIP5K2O43314 1243 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 CCT4P50991 539 aaKnown RBP11.31□□□□□ -0.6
SPG11-207ENST00000558138 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 DCAF8Q5TAQ9 597 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
SPG11-207ENST00000558138 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
SPG11-207ENST00000558138 PSMD1Q99460 953 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 MPHOSPH8Q99549 860 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 GREM2Q9H772 168 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
SPG11-207ENST00000558138 SBF1O95248 1867 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 TAF1P21675 1872 aa11.31□□□□□ -0.6
SPG11-207ENST00000558138 BCAR3O75815 825 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 ITGA6P23229 1130 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 IFIT5Q13325 482 aaKnown RBP11.3□□□□□ -0.6
SPG11-207ENST00000558138 CCDC57Q2TAC2 916 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 TTLL11Q8NHH1 800 aa11.3□□□□□ -0.6
SPG11-207ENST00000558138 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
SPG11-207ENST00000558138 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
SPG11-207ENST00000558138 AOC3Q16853 763 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 EYA3Q99504 573 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 PLA2G12BQ9BX93 195 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
SPG11-207ENST00000558138 UFL1O94874 794 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
SPG11-207ENST00000558138 KCNJ4P48050 445 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 PRELPP51888 382 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 GPSM2P81274 684 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 HDAC5Q9UQL6 1122 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
SPG11-207ENST00000558138 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 NBPF7P0C2Y1 421 aaPredicted RBP11.27□□□□□ -0.61
SPG11-207ENST00000558138 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
SPG11-207ENST00000558138 CASP7P55210 303 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
SPG11-207ENST00000558138 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
SPG11-207ENST00000558138 GLTPD2A6NH11 291 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 TRIM27P14373 513 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 FOXO4P98177 505 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
SPG11-207ENST00000558138 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
SPG11-207ENST00000558138 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms