RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 SPEF2Q9C093 1822 aa29.09■■■□□ 2.25
PABPN1-207ENST00000556821 DDX58O95786 925 aaKnown RBP29.09■■■□□ 2.25
PABPN1-207ENST00000556821 FAM89AQ96GI7 184 aa29.09■■■□□ 2.25
PABPN1-207ENST00000556821 RBM17Q96I25 401 aaKnown RBP29.08■■■□□ 2.25
PABPN1-207ENST00000556821 METTL22Q9BUU2 404 aaPredicted RBP29.08■■■□□ 2.25
PABPN1-207ENST00000556821 MAP3K2Q9Y2U5 619 aa29.08■■■□□ 2.25
PABPN1-207ENST00000556821 ABCC4O15439 1325 aa29.07■■■□□ 2.24
PABPN1-207ENST00000556821 ITGBL1O95965 494 aaPredicted RBP29.07■■■□□ 2.24
PABPN1-207ENST00000556821 SLC4A2P04920 1241 aa29.07■■■□□ 2.24
PABPN1-207ENST00000556821 KSR2Q6VAB6 950 aa29.07■■■□□ 2.24
PABPN1-207ENST00000556821 PI4KAP2A4QPH2 592 aa29.06■■■□□ 2.24
PABPN1-207ENST00000556821 PI4KAP1Q8N8J0 262 aa29.06■■■□□ 2.24
PABPN1-207ENST00000556821 LBX1P52954 281 aa29.05■■■□□ 2.24
PABPN1-207ENST00000556821 RTL5Q5HYW3 569 aaPredicted RBP29.05■■■□□ 2.24
PABPN1-207ENST00000556821 LDHDQ86WU2 507 aa29.05■■■□□ 2.24
PABPN1-207ENST00000556821 LTBP1Q14766 1721 aa29.04■■■□□ 2.24
PABPN1-207ENST00000556821 FKBP4Q02790 459 aaKnown RBP eCLIP29.04■■■□□ 2.243e-10■■□□□ 11.7
PABPN1-207ENST00000556821 AIDAQ96BJ3 306 aa29.04■■■□□ 2.24
PABPN1-207ENST00000556821 L3MBTL3Q96JM7 780 aaPredicted RBP29.04■■■□□ 2.24
PABPN1-207ENST00000556821 COL4A5P29400 1685 aa29.03■■■□□ 2.24
PABPN1-207ENST00000556821 PPEF1O14829 653 aaPredicted RBP29.03■■■□□ 2.24
PABPN1-207ENST00000556821 FLIIQ13045 1269 aa29.03■■■□□ 2.24
PABPN1-207ENST00000556821 RTKN2Q8IZC4 609 aa29.03■■■□□ 2.24
PABPN1-207ENST00000556821 CCDC191Q8NCU4 936 aa29.03■■■□□ 2.24
PABPN1-207ENST00000556821 ABHD8Q96I13 439 aa29.03■■■□□ 2.24
PABPN1-207ENST00000556821 TAF1DQ9H5J8 278 aaPredicted RBP29.03■■■□□ 2.24
PABPN1-207ENST00000556821 TMEM88BA6NKF7 163 aa29.02■■■□□ 2.24
PABPN1-207ENST00000556821 IGKV5-2P06315 115 aa29.02■■■□□ 2.24
PABPN1-207ENST00000556821 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
PABPN1-207ENST00000556821 ZBTB38Q8NAP3 1195 aaPredicted RBP29.02■■■□□ 2.24
PABPN1-207ENST00000556821 FAM161AQ3B820 660 aa29.01■■■□□ 2.23
PABPN1-207ENST00000556821 CC2D2BQ6DHV5 1058 aa29.01■■■□□ 2.23
PABPN1-207ENST00000556821 CWC25Q9NXE8 425 aaPredicted RBP29.01■■■□□ 2.23
PABPN1-207ENST00000556821 DUOX1Q9NRD9 1551 aa29.01■■■□□ 2.23
PABPN1-207ENST00000556821 SCN4AP35499 1836 aa29■■■□□ 2.23
PABPN1-207ENST00000556821 IRS4O14654 1257 aaPredicted RBP29■■■□□ 2.23
PABPN1-207ENST00000556821 HSPA8P11142 646 aaKnown RBP29■■■□□ 2.23
PABPN1-207ENST00000556821 SF3B3Q15393 1217 aaKnown RBP29■■■□□ 2.23
PABPN1-207ENST00000556821 ZNF277Q9NRM2 450 aaPredicted RBP29■■■□□ 2.23
PABPN1-207ENST00000556821 IQCA1LA6NCM1 817 aa28.99■■■□□ 2.23
PABPN1-207ENST00000556821 PCCAP05165 728 aaPredicted RBP28.99■■■□□ 2.23
PABPN1-207ENST00000556821 PSMD1Q99460 953 aa28.99■■■□□ 2.23
PABPN1-207ENST00000556821 PCDH10Q9P2E7 1040 aa28.99■■■□□ 2.23
PABPN1-207ENST00000556821 RGS19P49795 217 aa28.98■■■□□ 2.23
PABPN1-207ENST00000556821 MIER1Q8N108 512 aa28.98■■■□□ 2.23
PABPN1-207ENST00000556821 ATP6V0A2Q9Y487 856 aa28.98■■■□□ 2.23
PABPN1-207ENST00000556821 RASSF10A6NK89 507 aa28.97■■■□□ 2.23
PABPN1-207ENST00000556821 FKBP5Q13451 457 aaPredicted RBP28.97■■■□□ 2.23
PABPN1-207ENST00000556821 CWF19L2Q2TBE0 894 aaKnown RBP28.97■■■□□ 2.23
PABPN1-207ENST00000556821 DDX46Q7L014 1031 aaKnown RBP28.97■■■□□ 2.23
PABPN1-207ENST00000556821 JARID2Q92833 1246 aaPredicted RBP28.97■■■□□ 2.23
PABPN1-207ENST00000556821 E9PSI1 815 aa28.96■■■□□ 2.23
PABPN1-207ENST00000556821 SLFN5Q08AF3 891 aa28.96■■■□□ 2.23
PABPN1-207ENST00000556821 GRAPQ13588 217 aa28.96■■■□□ 2.23
PABPN1-207ENST00000556821 GRAPLQ8TC17 118 aaPredicted RBP28.96■■■□□ 2.23
PABPN1-207ENST00000556821 NEURL1BA8MQ27 555 aa28.95■■■□□ 2.22
PABPN1-207ENST00000556821 BBOX1O75936 387 aa28.95■■■□□ 2.22
PABPN1-207ENST00000556821 IARSP41252 1262 aaKnown RBP28.95■■■□□ 2.22
PABPN1-207ENST00000556821 NEXNQ0ZGT2 675 aa28.95■■■□□ 2.22
PABPN1-207ENST00000556821 CDCA7LQ96GN5 454 aa28.95■■■□□ 2.22
PABPN1-207ENST00000556821 CDHR2Q9BYE9 1310 aa28.94■■■□□ 2.22
PABPN1-207ENST00000556821 GRIPAP1Q4V328 841 aa28.94■■■□□ 2.22
PABPN1-207ENST00000556821 DNAAF4Q8WXU2 420 aa28.93■■■□□ 2.22
PABPN1-207ENST00000556821 CELF1Q92879 486 aaKnown RBP28.93■■■□□ 2.22
PABPN1-207ENST00000556821 SP8Q8IXZ3 490 aa28.92■■■□□ 2.22
PABPN1-207ENST00000556821 A0A1B0GUL6 1792 aa28.91■■■□□ 2.22
PABPN1-207ENST00000556821 DEFB115Q30KQ5 88 aa28.91■■■□□ 2.22
PABPN1-207ENST00000556821 F6X3S4 739 aa28.9■■■□□ 2.22
PABPN1-207ENST00000556821 PDE8AO60658 829 aa28.9■■■□□ 2.22
PABPN1-207ENST00000556821 ZNF541Q9H0D2 1346 aa28.9■■■□□ 2.22
PABPN1-207ENST00000556821 MAP2K1Q02750 393 aaPredicted RBP28.89■■■□□ 2.22
PABPN1-207ENST00000556821 TRMT2AQ8IZ69 625 aaKnown RBP28.89■■■□□ 2.22
PABPN1-207ENST00000556821 HSP90B1P14625 803 aaKnown RBP28.88■■■□□ 2.21
PABPN1-207ENST00000556821 GCKRQ14397 625 aa28.88■■■□□ 2.21
PABPN1-207ENST00000556821 LINS1Q8NG48 757 aa28.88■■■□□ 2.21
PABPN1-207ENST00000556821 SEC31BQ9NQW1 1179 aa28.88■■■□□ 2.21
PABPN1-207ENST00000556821 WDR33Q9C0J8 1336 aaKnown RBP28.88■■■□□ 2.21
PABPN1-207ENST00000556821 H7C1W4 665 aa28.87■■■□□ 2.21
PABPN1-207ENST00000556821 UBE3BQ7Z3V4 1068 aa28.87■■■□□ 2.21
PABPN1-207ENST00000556821 TMC4Q7Z404 712 aa28.87■■■□□ 2.21
PABPN1-207ENST00000556821 RTFDC1Q9BY42 306 aaPredicted RBP28.87■■■□□ 2.21
PABPN1-207ENST00000556821 FZD9O00144 591 aa28.86■■■□□ 2.21
PABPN1-207ENST00000556821 MLLT1Q03111 559 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-207ENST00000556821 CNTROBQ8N137 903 aa28.86■■■□□ 2.21
PABPN1-207ENST00000556821 TMX4Q9H1E5 349 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-207ENST00000556821 HACL1Q9UJ83 578 aa28.86■■■□□ 2.21
PABPN1-207ENST00000556821 PSME4Q14997 1843 aa28.85■■■□□ 2.21
PABPN1-207ENST00000556821 CASP7P55210 303 aa28.85■■■□□ 2.21
PABPN1-207ENST00000556821 ADAMTSL1Q8N6G6 1762 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 EPHX2P34913 555 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 CTSWP56202 376 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 CCDC152Q4G0S7 254 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 EAPPQ56P03 285 aaPredicted RBP28.84■■■□□ 2.21
PABPN1-207ENST00000556821 BEND3Q5T5X7 828 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 DPP8Q6V1X1 898 aaPredicted RBP28.84■■■□□ 2.21
PABPN1-207ENST00000556821 MPNDQ8N594 471 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 CCDC85AQ96PX6 553 aaPredicted RBP28.84■■■□□ 2.21
PABPN1-207ENST00000556821 SCN9AQ15858 1988 aa28.84■■■□□ 2.21
PABPN1-207ENST00000556821 RPS8P62241 208 aaKnown RBP28.83■■■□□ 2.21
PABPN1-207ENST00000556821 LARGE2Q8N3Y3 721 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms