RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-205ENST00000556607 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
SPTLC2-205ENST00000556607 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-205ENST00000556607 COL4A5P29400 1685 aa13.63□□□□□ -0.23
SPTLC2-205ENST00000556607 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-205ENST00000556607 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-205ENST00000556607 TSPYL6Q8N831 410 aa13.62□□□□□ -0.23
SPTLC2-205ENST00000556607 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
SPTLC2-205ENST00000556607 VPS33BQ9H267 617 aa13.62□□□□□ -0.23
SPTLC2-205ENST00000556607 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-205ENST00000556607 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 EPS15P42566 896 aa13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 MAP1SQ66K74 1059 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 JMYQ8N9B5 988 aa13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-205ENST00000556607 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 SF3B3Q15393 1217 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 WWC1Q8IX03 1113 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 CELF1Q92879 486 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
SPTLC2-205ENST00000556607 TMEM88BA6NKF7 163 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 RAD17O75943 681 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 SCNN1DP51172 638 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 CXCL9Q07325 125 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 TRIM28Q13263 835 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 METTL22Q9BUU2 404 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 LTBP1Q14766 1721 aa13.59□□□□□ -0.23
SPTLC2-205ENST00000556607 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.23
SPTLC2-205ENST00000556607 G3V3G9 751 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 TNIP1Q15025 636 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
SPTLC2-205ENST00000556607 LRRC37AA6NMS7 1700 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 PI4KAP2A4QPH2 592 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 PDE8AO60658 829 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 HSPA1AP0DMV8 641 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 HSPA1BP0DMV9 641 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 PI4KAP1Q8N8J0 262 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 EYA3Q99504 573 aa13.57□□□□□ -0.24
SPTLC2-205ENST00000556607 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 GPSM2P81274 684 aa13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 DBNDD1Q9H9R9 158 aa13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 SEC31BQ9NQW1 1179 aa13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 ADARB2Q9NS39 739 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 ABT1Q9ULW3 272 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-205ENST00000556607 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
SPTLC2-205ENST00000556607 MYH3P11055 1940 aa13.55□□□□□ -0.24
SPTLC2-205ENST00000556607 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
SPTLC2-205ENST00000556607 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
SPTLC2-205ENST00000556607 ZC3H12CQ9C0D7 883 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-205ENST00000556607 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 COL4A1P02462 1669 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 DOK7Q18PE1 504 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 G2E3Q7L622 706 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 POLLQ9UGP5 575 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 IL16Q14005 1332 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
SPTLC2-205ENST00000556607 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 H7C1D1 291 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 ECE2O60344 883 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 UFL1O94874 794 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms