RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 GPR162Q16538 588 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 EPHA10Q5JZY3 1008 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
SRSF5-214ENST00000556436 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 USP44Q9H0E7 712 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
SRSF5-214ENST00000556436 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
SRSF5-214ENST00000556436 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
SRSF5-214ENST00000556436 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
SRSF5-214ENST00000556436 FER1L6Q2WGJ9 1857 aa16.56■□□□□ 0.24
SRSF5-214ENST00000556436 FOXO4P98177 505 aa16.55■□□□□ 0.24
SRSF5-214ENST00000556436 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
SRSF5-214ENST00000556436 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
SRSF5-214ENST00000556436 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
SRSF5-214ENST00000556436 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
SRSF5-214ENST00000556436 MEIS3Q99687 375 aa16.55■□□□□ 0.24
SRSF5-214ENST00000556436 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
SRSF5-214ENST00000556436 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
SRSF5-214ENST00000556436 SNED1Q8TER0 1413 aa16.54■□□□□ 0.24
SRSF5-214ENST00000556436 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
SRSF5-214ENST00000556436 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
SRSF5-214ENST00000556436 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
SRSF5-214ENST00000556436 C7orf43Q8WVR3 580 aa16.54■□□□□ 0.24
SRSF5-214ENST00000556436 GREM2Q9H772 168 aa16.54■□□□□ 0.24
SRSF5-214ENST00000556436 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
SRSF5-214ENST00000556436 C21orf2O43822 256 aa16.53■□□□□ 0.24
SRSF5-214ENST00000556436 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
SRSF5-214ENST00000556436 GRAPQ13588 217 aa16.53■□□□□ 0.24
SRSF5-214ENST00000556436 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
SRSF5-214ENST00000556436 C20orf194Q5TEA3 1177 aa16.53■□□□□ 0.24
SRSF5-214ENST00000556436 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
SRSF5-214ENST00000556436 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
SRSF5-214ENST00000556436 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
SRSF5-214ENST00000556436 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
SRSF5-214ENST00000556436 CSF1RP07333 972 aa16.52■□□□□ 0.24
SRSF5-214ENST00000556436 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
SRSF5-214ENST00000556436 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
SRSF5-214ENST00000556436 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
SRSF5-214ENST00000556436 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
SRSF5-214ENST00000556436 CHD4Q14839 1912 aa16.52■□□□□ 0.23
SRSF5-214ENST00000556436 SBF1O95248 1867 aa16.52■□□□□ 0.23
SRSF5-214ENST00000556436 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
SRSF5-214ENST00000556436 UBTFL1P0CB47 393 aaPredicted RBP16.51■□□□□ 0.23
SRSF5-214ENST00000556436 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
SRSF5-214ENST00000556436 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
SRSF5-214ENST00000556436 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
SRSF5-214ENST00000556436 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
SRSF5-214ENST00000556436 NFKBIEO00221 500 aa16.5■□□□□ 0.23
SRSF5-214ENST00000556436 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
SRSF5-214ENST00000556436 RASSF7Q02833 373 aa16.5■□□□□ 0.23
SRSF5-214ENST00000556436 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
SRSF5-214ENST00000556436 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
SRSF5-214ENST00000556436 ITGA6P23229 1130 aa16.49■□□□□ 0.23
SRSF5-214ENST00000556436 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
SRSF5-214ENST00000556436 PRELPP51888 382 aa16.48■□□□□ 0.23
SRSF5-214ENST00000556436 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
SRSF5-214ENST00000556436 ARHGAP27Q6ZUM4 889 aa16.48■□□□□ 0.23
SRSF5-214ENST00000556436 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
SRSF5-214ENST00000556436 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
SRSF5-214ENST00000556436 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
SRSF5-214ENST00000556436 BBOX1O75936 387 aa16.47■□□□□ 0.23
SRSF5-214ENST00000556436 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
SRSF5-214ENST00000556436 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
SRSF5-214ENST00000556436 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
SRSF5-214ENST00000556436 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
SRSF5-214ENST00000556436 GNAI3P08754 354 aa16.46■□□□□ 0.23
SRSF5-214ENST00000556436 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
SRSF5-214ENST00000556436 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
SRSF5-214ENST00000556436 ZNF594Q96JF6 807 aaPredicted RBP16.46■□□□□ 0.23
SRSF5-214ENST00000556436 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
SRSF5-214ENST00000556436 C1orf115Q9H7X2 142 aa16.46■□□□□ 0.23
SRSF5-214ENST00000556436 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
SRSF5-214ENST00000556436 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
SRSF5-214ENST00000556436 MS4A1P11836 297 aa16.45■□□□□ 0.22
SRSF5-214ENST00000556436 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
SRSF5-214ENST00000556436 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
SRSF5-214ENST00000556436 COL4A5P29400 1685 aa16.45■□□□□ 0.22
SRSF5-214ENST00000556436 ANKRD18BA2A2Z9 1011 aa16.44■□□□□ 0.22
SRSF5-214ENST00000556436 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
SRSF5-214ENST00000556436 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
SRSF5-214ENST00000556436 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
SRSF5-214ENST00000556436 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
SRSF5-214ENST00000556436 GNAI2P04899 355 aa16.43■□□□□ 0.22
SRSF5-214ENST00000556436 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
SRSF5-214ENST00000556436 GPSM2P81274 684 aa16.43■□□□□ 0.22
SRSF5-214ENST00000556436 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
SRSF5-214ENST00000556436 TAOK3Q9H2K8 898 aa16.43■□□□□ 0.22
SRSF5-214ENST00000556436 IGHMBP2P38935 993 aaKnown RBP16.42■□□□□ 0.22
SRSF5-214ENST00000556436 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
SRSF5-214ENST00000556436 CC2D2BQ6DHV5 1058 aa16.42■□□□□ 0.22
SRSF5-214ENST00000556436 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
SRSF5-214ENST00000556436 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
SRSF5-214ENST00000556436 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
SRSF5-214ENST00000556436 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
SRSF5-214ENST00000556436 PSMD1Q99460 953 aa16.41■□□□□ 0.22
SRSF5-214ENST00000556436 PUS3Q9BZE2 481 aaKnown RBP16.41■□□□□ 0.22
SRSF5-214ENST00000556436 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
SRSF5-214ENST00000556436 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms