RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ZIC5Q96T25 663 aa18.45■□□□□ 0.54
ACTN1-219ENST00000556432 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
ACTN1-219ENST00000556432 PGAP2Q9UHJ9 254 aa18.45■□□□□ 0.54
ACTN1-219ENST00000556432 H7C1D1 291 aa18.44■□□□□ 0.54
ACTN1-219ENST00000556432 HIRAP54198 1017 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-219ENST00000556432 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
ACTN1-219ENST00000556432 RTFDC1Q9BY42 306 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-219ENST00000556432 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
ACTN1-219ENST00000556432 SOX10P56693 466 aa18.43■□□□□ 0.54
ACTN1-219ENST00000556432 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
ACTN1-219ENST00000556432 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
ACTN1-219ENST00000556432 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
ACTN1-219ENST00000556432 SHTN1A0MZ66 631 aa18.42■□□□□ 0.54
ACTN1-219ENST00000556432 TNRC18O15417 2968 aaPredicted RBP18.42■□□□□ 0.54
ACTN1-219ENST00000556432 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
ACTN1-219ENST00000556432 BBOX1O75936 387 aa18.41■□□□□ 0.54
ACTN1-219ENST00000556432 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
ACTN1-219ENST00000556432 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
ACTN1-219ENST00000556432 KRT26Q7Z3Y9 468 aa18.41■□□□□ 0.54
ACTN1-219ENST00000556432 SP8Q8IXZ3 490 aa18.41■□□□□ 0.54
ACTN1-219ENST00000556432 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
ACTN1-219ENST00000556432 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
ACTN1-219ENST00000556432 RGMBQ6NW40 437 aa18.4■□□□□ 0.54
ACTN1-219ENST00000556432 DLK2Q6UY11 383 aa18.4■□□□□ 0.54
ACTN1-219ENST00000556432 C2orf69Q8N8R5 385 aa18.4■□□□□ 0.54
ACTN1-219ENST00000556432 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
ACTN1-219ENST00000556432 SAMD7Q7Z3H4 446 aa18.39■□□□□ 0.53
ACTN1-219ENST00000556432 GBA2Q9HCG7 927 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-219ENST00000556432 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-219ENST00000556432 ERBB4Q15303 1308 aa18.39■□□□□ 0.53
ACTN1-219ENST00000556432 YDJCA8MPS7 323 aa18.38■□□□□ 0.53
ACTN1-219ENST00000556432 TRPA1O75762 1119 aa18.38■□□□□ 0.53
ACTN1-219ENST00000556432 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
ACTN1-219ENST00000556432 ZNF157P51786 506 aaPredicted RBP18.38■□□□□ 0.53
ACTN1-219ENST00000556432 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
ACTN1-219ENST00000556432 CCDC102AQ96A19 550 aa18.38■□□□□ 0.53
ACTN1-219ENST00000556432 SAGE1Q9NXZ1 904 aa18.38■□□□□ 0.53
ACTN1-219ENST00000556432 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
ACTN1-219ENST00000556432 GRAPQ13588 217 aa18.37■□□□□ 0.53
ACTN1-219ENST00000556432 RBM26Q5T8P6 1007 aaKnown RBP18.37■□□□□ 0.53
ACTN1-219ENST00000556432 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
ACTN1-219ENST00000556432 DCPSQ96C86 337 aaKnown RBP18.37■□□□□ 0.53
ACTN1-219ENST00000556432 FAM155AB1AL88 458 aaPredicted RBP18.36■□□□□ 0.53
ACTN1-219ENST00000556432 ADM5C9JUS6 153 aa18.36■□□□□ 0.53
ACTN1-219ENST00000556432 PSMD14O00487 310 aa18.36■□□□□ 0.53
ACTN1-219ENST00000556432 TRMT112Q9UI30 125 aaKnown RBP18.36■□□□□ 0.53
ACTN1-219ENST00000556432 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
ACTN1-219ENST00000556432 ANXA1P04083 346 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 DPF2Q92785 391 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 DBNDD1Q9H9R9 158 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 RNF186Q9NXI6 227 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
ACTN1-219ENST00000556432 RIMBP2O15034 1052 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 AIMP1Q12904 312 aaKnown RBP18.34■□□□□ 0.53
ACTN1-219ENST00000556432 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 LAMB2P55268 1798 aa18.34■□□□□ 0.53
ACTN1-219ENST00000556432 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.53
ACTN1-219ENST00000556432 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.53
ACTN1-219ENST00000556432 C6orf229H3BNL8 230 aa18.33■□□□□ 0.52
ACTN1-219ENST00000556432 EGFRP00533 1210 aa18.33■□□□□ 0.52
ACTN1-219ENST00000556432 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
ACTN1-219ENST00000556432 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
ACTN1-219ENST00000556432 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
ACTN1-219ENST00000556432 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
ACTN1-219ENST00000556432 PRPF38BQ5VTL8 546 aaKnown RBP18.32■□□□□ 0.52
ACTN1-219ENST00000556432 CTU1Q7Z7A3 348 aaKnown RBP18.32■□□□□ 0.52
ACTN1-219ENST00000556432 DUOX1Q9NRD9 1551 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
ACTN1-219ENST00000556432 PDIA6Q15084 440 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 ANKRD36CQ5JPF3 1778 aa18.31■□□□□ 0.52
ACTN1-219ENST00000556432 AKAP11Q9UKA4 1901 aa18.3■□□□□ 0.52
ACTN1-219ENST00000556432 ECE2O60344 883 aa18.3■□□□□ 0.52
ACTN1-219ENST00000556432 SLC10A3P09131 477 aa18.3■□□□□ 0.52
ACTN1-219ENST00000556432 DOK7Q18PE1 504 aa18.3■□□□□ 0.52
ACTN1-219ENST00000556432 LRP10Q7Z4F1 713 aa18.3■□□□□ 0.52
ACTN1-219ENST00000556432 TAF1P21675 1872 aa18.29■□□□□ 0.52
ACTN1-219ENST00000556432 TCIRG1Q13488 830 aa18.29■□□□□ 0.52
ACTN1-219ENST00000556432 CSRNP1Q96S65 589 aa18.29■□□□□ 0.52
ACTN1-219ENST00000556432 G3V3G9 751 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 EYA3Q99504 573 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 KCNQ5Q9NR82 932 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 HDAC9Q9UKV0 1011 aa18.28■□□□□ 0.52
ACTN1-219ENST00000556432 POLR2AP24928 1970 aaKnown RBP18.28■□□□□ 0.52
ACTN1-219ENST00000556432 LRRC37AA6NMS7 1700 aa18.27■□□□□ 0.52
ACTN1-219ENST00000556432 GPSM2P81274 684 aa18.27■□□□□ 0.52
ACTN1-219ENST00000556432 CDCA5Q96FF9 252 aa18.27■□□□□ 0.52
ACTN1-219ENST00000556432 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
ACTN1-219ENST00000556432 POLLQ9UGP5 575 aa18.27■□□□□ 0.52
ACTN1-219ENST00000556432 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms