RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 ELL2O00472 640 aaPredicted RBP27.89■■■□□ 2.06
SDR39U1-216ENST00000556175 ITGBL1O95965 494 aaPredicted RBP27.89■■■□□ 2.06
SDR39U1-216ENST00000556175 HSP90B1P14625 803 aaKnown RBP27.89■■■□□ 2.06
SDR39U1-216ENST00000556175 SF3B3Q15393 1217 aaKnown RBP27.89■■■□□ 2.06
SDR39U1-216ENST00000556175 PCNTO95613 3336 aa27.89■■■□□ 2.06
SDR39U1-216ENST00000556175 TMEM88BA6NKF7 163 aa27.88■■■□□ 2.05
SDR39U1-216ENST00000556175 LRRC37AA6NMS7 1700 aa27.88■■■□□ 2.05
SDR39U1-216ENST00000556175 SCNN1DP51172 638 aa27.88■■■□□ 2.05
SDR39U1-216ENST00000556175 KIAA2012Q0VF49 1180 aa27.87■■■□□ 2.05
SDR39U1-216ENST00000556175 CCDC30Q5VVM6 783 aa27.87■■■□□ 2.05
SDR39U1-216ENST00000556175 CNTROBQ8N137 903 aa27.87■■■□□ 2.05
SDR39U1-216ENST00000556175 ZNF428Q96B54 188 aa27.87■■■□□ 2.05
SDR39U1-216ENST00000556175 MKRN1Q9UHC7 482 aaKnown RBP27.87■■■□□ 2.05
SDR39U1-216ENST00000556175 IRS4O14654 1257 aaPredicted RBP27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 DDX58O95786 925 aaKnown RBP27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 CCDC27Q2M243 656 aa27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 USP50Q70EL3 339 aaPredicted RBP27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 C8orf58Q8NAV2 365 aa27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 PHAXQ9H814 394 aaKnown RBP27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 LTBP1Q14766 1721 aa27.86■■■□□ 2.05
SDR39U1-216ENST00000556175 MAP1SQ66K74 1059 aaPredicted RBP27.85■■■□□ 2.05
SDR39U1-216ENST00000556175 ZBTB38Q8NAP3 1195 aaPredicted RBP27.85■■■□□ 2.05
SDR39U1-216ENST00000556175 CNTNAP1P78357 1384 aa27.85■■■□□ 2.05
SDR39U1-216ENST00000556175 EPS15P42566 896 aa27.84■■■□□ 2.05
SDR39U1-216ENST00000556175 TAF1P21675 1872 aa27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 HSPA1AP0DMV8 641 aaKnown RBP27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 HSPA1BP0DMV9 641 aaKnown RBP27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 RTL5Q5HYW3 569 aaPredicted RBP27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 CCDC191Q8NCU4 936 aa27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 MYD88Q99836 296 aa27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 CDHR2Q9BYE9 1310 aa27.83■■■□□ 2.05
SDR39U1-216ENST00000556175 CXCL9Q07325 125 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 TNIP1Q15025 636 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 CCDC184Q52MB2 194 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 CIAPIN1Q6FI81 312 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 CELF1Q92879 486 aaKnown RBP27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 GPRC5DQ9NZD1 345 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 DUOX1Q9NRD9 1551 aa27.82■■■□□ 2.04
SDR39U1-216ENST00000556175 NCBP3Q53F19 620 aaKnown RBP27.81■■■□□ 2.04
SDR39U1-216ENST00000556175 ADARB2Q9NS39 739 aaKnown RBP27.81■■■□□ 2.04
SDR39U1-216ENST00000556175 CWC25Q9NXE8 425 aaPredicted RBP27.8■■■□□ 2.04
SDR39U1-216ENST00000556175 NSFL1CQ9UNZ2 370 aaKnown RBP27.8■■■□□ 2.04
SDR39U1-216ENST00000556175 WWC1Q8IX03 1113 aa27.79■■■□□ 2.04
SDR39U1-216ENST00000556175 METTL22Q9BUU2 404 aaPredicted RBP27.79■■■□□ 2.04
SDR39U1-216ENST00000556175 STK31Q9BXU1 1019 aa27.79■■■□□ 2.04
SDR39U1-216ENST00000556175 IL16Q14005 1332 aa27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 ANP32CO43423 234 aa27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 PCCAP05165 728 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 GMPSP49915 693 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 WASHC4Q2M389 1173 aa27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 TSR2Q969E8 191 aaKnown RBP27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 BCL2L13Q9BXK5 485 aa27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 MRS2Q9HD23 443 aa27.78■■■□□ 2.04
SDR39U1-216ENST00000556175 RPS8P62241 208 aaKnown RBP27.77■■■□□ 2.04
SDR39U1-216ENST00000556175 TSPYL6Q8N831 410 aa27.77■■■□□ 2.04
SDR39U1-216ENST00000556175 EYA3Q99504 573 aa27.77■■■□□ 2.04
SDR39U1-216ENST00000556175 RAD17O75943 681 aa27.76■■■□□ 2.03
SDR39U1-216ENST00000556175 CCDC152Q4G0S7 254 aa27.76■■■□□ 2.03
SDR39U1-216ENST00000556175 COL13A1Q5TAT6 717 aaPredicted RBP27.76■■■□□ 2.03
SDR39U1-216ENST00000556175 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
SDR39U1-216ENST00000556175 C6orf229H3BNL8 230 aa27.75■■■□□ 2.03
SDR39U1-216ENST00000556175 PDE8AO60658 829 aa27.75■■■□□ 2.03
SDR39U1-216ENST00000556175 KSR2Q6VAB6 950 aa27.75■■■□□ 2.03
SDR39U1-216ENST00000556175 MAP3K2Q9Y2U5 619 aa27.75■■■□□ 2.03
SDR39U1-216ENST00000556175 RASSF10A6NK89 507 aa27.74■■■□□ 2.03
SDR39U1-216ENST00000556175 GPSM2P81274 684 aa27.74■■■□□ 2.03
SDR39U1-216ENST00000556175 NEXNQ0ZGT2 675 aa27.74■■■□□ 2.03
SDR39U1-216ENST00000556175 TWISTNBQ3B726 338 aaPredicted RBP27.74■■■□□ 2.03
SDR39U1-216ENST00000556175 VEGFBP49765 207 aa27.73■■■□□ 2.03
SDR39U1-216ENST00000556175 ABT1Q9ULW3 272 aaKnown RBP27.73■■■□□ 2.03
SDR39U1-216ENST00000556175 YDJCA8MPS7 323 aa27.72■■■□□ 2.03
SDR39U1-216ENST00000556175 DEFB115Q30KQ5 88 aa27.72■■■□□ 2.03
SDR39U1-216ENST00000556175 POLLQ9UGP5 575 aa27.72■■■□□ 2.03
SDR39U1-216ENST00000556175 COL4A1P02462 1669 aa27.72■■■□□ 2.03
SDR39U1-216ENST00000556175 PI4KAP2A4QPH2 592 aa27.71■■■□□ 2.03
SDR39U1-216ENST00000556175 PI4KAP1Q8N8J0 262 aa27.71■■■□□ 2.03
SDR39U1-216ENST00000556175 SEC31BQ9NQW1 1179 aa27.71■■■□□ 2.03
SDR39U1-216ENST00000556175 PODXL2Q9NZ53 605 aa27.71■■■□□ 2.03
SDR39U1-216ENST00000556175 TBC1D16Q8TBP0 767 aa27.7■■■□□ 2.02
SDR39U1-216ENST00000556175 ZC3H15Q8WU90 426 aaKnown RBP27.7■■■□□ 2.02
SDR39U1-216ENST00000556175 H7C1D1 291 aa27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 RIMBP2O15034 1052 aa27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 AIDAQ96BJ3 306 aa27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 DBNDD1Q9H9R9 158 aa27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 ANKIB1Q9P2G1 1089 aa27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 CNOT7Q9UIV1 285 aaKnown RBP27.69■■■□□ 2.02
SDR39U1-216ENST00000556175 TRPM7Q96QT4 1865 aa27.68■■■□□ 2.02
SDR39U1-216ENST00000556175 TNS4Q8IZW8 715 aa27.68■■■□□ 2.02
SDR39U1-216ENST00000556175 DPF2Q92785 391 aa27.68■■■□□ 2.02
SDR39U1-216ENST00000556175 ZC3H12CQ9C0D7 883 aaKnown RBP27.68■■■□□ 2.02
SDR39U1-216ENST00000556175 ECE2O60344 883 aa27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 SLC4A2P04920 1241 aa27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 RPS12P25398 132 aaKnown RBP27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 ANKRD18AQ8IVF6 992 aa27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 PGAP2Q9UHJ9 254 aa27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 GGA1Q9UJY5 639 aa27.67■■■□□ 2.02
SDR39U1-216ENST00000556175 PSMD14O00487 310 aa27.66■■■□□ 2.02
SDR39U1-216ENST00000556175 UFL1O94874 794 aa27.66■■■□□ 2.02
SDR39U1-216ENST00000556175 IGKV5-2P06315 115 aa27.66■■■□□ 2.02
SDR39U1-216ENST00000556175 WDR63Q8IWG1 891 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms