RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 CELF1Q92879 486 aaKnown RBP17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 HACL1Q9UJ83 578 aa17.74■□□□□ 0.43
SDR39U1-214ENST00000555778 MYH3P11055 1940 aa17.73■□□□□ 0.43
SDR39U1-214ENST00000555778 EPHX2P34913 555 aa17.73■□□□□ 0.43
SDR39U1-214ENST00000555778 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
SDR39U1-214ENST00000555778 GPC2Q8N158 579 aa17.73■□□□□ 0.43
SDR39U1-214ENST00000555778 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
SDR39U1-214ENST00000555778 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
SDR39U1-214ENST00000555778 G2E3Q7L622 706 aa17.71■□□□□ 0.43
SDR39U1-214ENST00000555778 MPNDQ8N594 471 aa17.71■□□□□ 0.43
SDR39U1-214ENST00000555778 SCNN1DP51172 638 aa17.7■□□□□ 0.42
SDR39U1-214ENST00000555778 SP8Q8IXZ3 490 aa17.7■□□□□ 0.42
SDR39U1-214ENST00000555778 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SDR39U1-214ENST00000555778 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
SDR39U1-214ENST00000555778 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
SDR39U1-214ENST00000555778 BBOX1O75936 387 aa17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 DDX58O95786 925 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 LMOD1P29536 600 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 EPS15P42566 896 aa17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-214ENST00000555778 PI4KAP2A4QPH2 592 aa17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 RAD17O75943 681 aa17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 CWF19L2Q2TBE0 894 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 PI4KAP1Q8N8J0 262 aa17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 IL16Q14005 1332 aa17.68■□□□□ 0.42
SDR39U1-214ENST00000555778 IGKV5-2P06315 115 aa17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 GPSM2P81274 684 aa17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 KIAA2012Q0VF49 1180 aa17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 TRIM28Q13263 835 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-214ENST00000555778 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 FMR1Q06787 632 aaKnown RBP eCLIP17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 CXCL9Q07325 125 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 DBNDD1Q9H9R9 158 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
SDR39U1-214ENST00000555778 SHTN1A0MZ66 631 aa17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 ZNRF3Q9ULT6 936 aa17.65■□□□□ 0.42
SDR39U1-214ENST00000555778 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 FLIIQ13045 1269 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 JMYQ8N9B5 988 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
SDR39U1-214ENST00000555778 CTSWP56202 376 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 CIAPIN1Q6FI81 312 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 UBE3BQ7Z3V4 1068 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 TMC4Q7Z404 712 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 PNMA8AQ86V59 439 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 GPRC5DQ9NZD1 345 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 TRPM7Q96QT4 1865 aa17.63■□□□□ 0.41
SDR39U1-214ENST00000555778 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 TRAF5O00463 557 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 PDE8AO60658 829 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 UFL1O94874 794 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 RPS8P62241 208 aaKnown RBP17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
SDR39U1-214ENST00000555778 A0A1B0GUL6 1792 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 TBC1D16Q8TBP0 767 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 ANKIB1Q9P2G1 1089 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 CDHR2Q9BYE9 1310 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 PSME4Q14997 1843 aa17.61■□□□□ 0.41
SDR39U1-214ENST00000555778 F6X3S4 739 aa17.6■□□□□ 0.41
SDR39U1-214ENST00000555778 ECE2O60344 883 aa17.6■□□□□ 0.41
SDR39U1-214ENST00000555778 HSPA1AP0DMV8 641 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-214ENST00000555778 HSPA1BP0DMV9 641 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-214ENST00000555778 WDR63Q8IWG1 891 aa17.6■□□□□ 0.41
SDR39U1-214ENST00000555778 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms