RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 BRDTQ58F21 947 aaPredicted RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TCP11L1Q9NUJ3 509 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ME1P48163 572 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 SARNPP82979 210 aaKnown RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 MFSD6Q6ZSS7 791 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 HOOK3Q86VS8 718 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TMEM57Q8N5G2 664 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 SUDS3Q9H7L9 328 aaPredicted RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 AOX1Q06278 1338 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PREX2Q70Z35 1606 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 ATP7BP35670 1465 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 NCBP1Q09161 790 aaKnown RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 GRM8O00222 908 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 SPATA32Q96LK8 384 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 TNMDQ9H2S6 317 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 HMGB1P1B2RPK0 211 aaPredicted RBP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 NEBLO76041 1014 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 MCM3P25205 808 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 TMEM87AQ8NBN3 555 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 HOXC9P31274 260 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 SSH1Q8WYL5 1049 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
LINC00641-201ENST00000555379 SCLT1Q96NL6 688 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
LINC00641-201ENST00000555379 GOLIM4O00461 696 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 MCM5P33992 734 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 CCDC83Q8IWF9 413 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 IFIT3O14879 490 aaKnown RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 UGGT1Q9NYU2 1555 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 PLBD2Q8NHP8 589 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 LIMCH1Q9UPQ0 1083 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 BLMP54132 1417 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 GOLGA6L7A0A1B0GV03 622 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 RNMTO43148 476 aaKnown RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NEMFO60524 1076 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 WDR66Q8TBY9 1149 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ANO10Q9NW15 660 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ERLIN1O75477 346 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 BCAR3O75815 825 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TNNT1P13805 278 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TNFAIP1Q13829 316 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SLC5A4Q9NY91 659 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 IGSF3O75054 1194 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 DDX19AQ9NUU7 478 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CWC27Q6UX04 472 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NUP62CLQ9H1M0 184 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SERPINC1P01008 464 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 MINDY4BA8MYZ0 360 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ESPNB1AK53 854 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 RANBP6O60518 1105 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NLRP5P59047 1200 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 PABPC4Q13310 644 aaKnown RBP eCLIP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TAF4BQ92750 862 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
LINC00641-201ENST00000555379 ATP8B2P98198 1209 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms