RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 BRDTQ58F21 947 aaPredicted RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TCP11L1Q9NUJ3 509 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ME1P48163 572 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 SARNPP82979 210 aaKnown RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 MFSD6Q6ZSS7 791 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 HOOK3Q86VS8 718 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 TMEM57Q8N5G2 664 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 SUDS3Q9H7L9 328 aaPredicted RBP9.73□□□□□ -0.85
LINC00641-201ENST00000555379 AOX1Q06278 1338 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PREX2Q70Z35 1606 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 ATP7BP35670 1465 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 NCBP1Q09161 790 aaKnown RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 GRM8O00222 908 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 SPATA32Q96LK8 384 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 TNMDQ9H2S6 317 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
LINC00641-201ENST00000555379 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
LINC00641-201ENST00000555379 HMGB1P1B2RPK0 211 aaPredicted RBP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 NEBLO76041 1014 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 MCM3P25205 808 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 TMEM87AQ8NBN3 555 aa9.71□□□□□ -0.85
LINC00641-201ENST00000555379 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.85
LINC00641-201ENST00000555379 HOXC9P31274 260 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 SSH1Q8WYL5 1049 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
LINC00641-201ENST00000555379 SCLT1Q96NL6 688 aa9.71□□□□□ -0.86
LINC00641-201ENST00000555379 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
LINC00641-201ENST00000555379 GOLIM4O00461 696 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 MCM5P33992 734 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 CCDC83Q8IWF9 413 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 IFIT3O14879 490 aaKnown RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 UGGT1Q9NYU2 1555 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 PLBD2Q8NHP8 589 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 LIMCH1Q9UPQ0 1083 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 BLMP54132 1417 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 GOLGA6L7A0A1B0GV03 622 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 RNMTO43148 476 aaKnown RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NEMFO60524 1076 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 WDR66Q8TBY9 1149 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
LINC00641-201ENST00000555379 ANO10Q9NW15 660 aa9.7□□□□□ -0.86
LINC00641-201ENST00000555379 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ERLIN1O75477 346 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 BCAR3O75815 825 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TNNT1P13805 278 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TNFAIP1Q13829 316 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SLC5A4Q9NY91 659 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 IGSF3O75054 1194 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 DDX19AQ9NUU7 478 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 CWC27Q6UX04 472 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NUP62CLQ9H1M0 184 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SERPINC1P01008 464 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 MINDY4BA8MYZ0 360 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 ESPNB1AK53 854 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 RANBP6O60518 1105 aaKnown RBP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 NLRP5P59047 1200 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 PABPC4Q13310 644 aaKnown RBP eCLIP9.69□□□□□ -0.86
LINC00641-201ENST00000555379 TAF4BQ92750 862 aa9.69□□□□□ -0.86
LINC00641-201ENST00000555379 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
LINC00641-201ENST00000555379 ATP8B2P98198 1209 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms