RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 UBR1Q8IWV7 1749 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 A0A1B0GUL7 405 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 HOXC9P31274 260 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 KCND1Q9NSA2 647 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 AMOTL2Q9Y2J4 779 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 RRP15Q9Y3B9 282 aaKnown RBP18.36■□□□□ 0.53
SYNE3-203ENST00000554873 JRKLQ9Y4A0 524 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 SRGAP3O43295 1099 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 AK2P54819 239 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 FILIP1Q7Z7B0 1213 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 UBXN6Q9BZV1 441 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 ATP8B1O43520 1251 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 NOM1Q5C9Z4 860 aaKnown RBP18.36■□□□□ 0.53
SYNE3-203ENST00000554873 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
SYNE3-203ENST00000554873 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
SYNE3-203ENST00000554873 SKILP12757 684 aa18.35■□□□□ 0.53
SYNE3-203ENST00000554873 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SYNE3-203ENST00000554873 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
SYNE3-203ENST00000554873 DNM1Q05193 864 aaKnown RBP18.34■□□□□ 0.53
SYNE3-203ENST00000554873 ARHGAP29Q52LW3 1261 aa18.34■□□□□ 0.53
SYNE3-203ENST00000554873 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
SYNE3-203ENST00000554873 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
SYNE3-203ENST00000554873 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
SYNE3-203ENST00000554873 AK7Q96M32 723 aa18.34■□□□□ 0.53
SYNE3-203ENST00000554873 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.53
SYNE3-203ENST00000554873 SPG7Q9UQ90 795 aa18.33■□□□□ 0.53
SYNE3-203ENST00000554873 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.52
SYNE3-203ENST00000554873 CPA1P15085 419 aa18.33■□□□□ 0.52
SYNE3-203ENST00000554873 IQUBQ8NA54 791 aa18.33■□□□□ 0.52
SYNE3-203ENST00000554873 TRMT1Q9NXH9 659 aaKnown RBP18.33■□□□□ 0.52
SYNE3-203ENST00000554873 TTC31Q49AM3 519 aaPredicted RBP18.32■□□□□ 0.52
SYNE3-203ENST00000554873 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
SYNE3-203ENST00000554873 CCDC93Q567U6 631 aa18.32■□□□□ 0.52
SYNE3-203ENST00000554873 PSD3Q9NYI0 1048 aa18.32■□□□□ 0.52
SYNE3-203ENST00000554873 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
SYNE3-203ENST00000554873 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
SYNE3-203ENST00000554873 CAMK4Q16566 473 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 USHBP1Q8N6Y0 703 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 TNMDQ9H2S6 317 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
SYNE3-203ENST00000554873 BEND3Q5T5X7 828 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 DHX37Q8IY37 1157 aaKnown RBP18.31■□□□□ 0.52
SYNE3-203ENST00000554873 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 SMC3Q9UQE7 1217 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 LARGE1O95461 756 aa18.31■□□□□ 0.52
SYNE3-203ENST00000554873 DTNBO60941 627 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 PRR29P0C7W0 189 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 ZNF165P49910 485 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 CCZ1BP86790 482 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 CCZ1P86791 482 aaPredicted RBP18.3■□□□□ 0.52
SYNE3-203ENST00000554873 ARID5BQ14865 1188 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 SARM1Q6SZW1 724 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 MRFAP1L1Q96HT8 127 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYNE3-203ENST00000554873 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
SYNE3-203ENST00000554873 MAGEA9P43362 315 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 CKAP2LQ8IYA6 745 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 EXOC4Q96A65 974 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 HYPKQ9NX55 129 aa18.3■□□□□ 0.52
SYNE3-203ENST00000554873 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYNE3-203ENST00000554873 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 SNW1Q13573 536 aaKnown RBP18.29■□□□□ 0.52
SYNE3-203ENST00000554873 LRRN4CLQ8ND94 238 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 ORC3Q9UBD5 711 aaPredicted RBP18.29■□□□□ 0.52
SYNE3-203ENST00000554873 CEP83Q9Y592 693 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
SYNE3-203ENST00000554873 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
SYNE3-203ENST00000554873 RBM43Q6ZSC3 357 aaKnown RBP18.29■□□□□ 0.52
SYNE3-203ENST00000554873 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 DEF6Q9H4E7 631 aa18.29■□□□□ 0.52
SYNE3-203ENST00000554873 CAVIN2O95810 425 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 CCDC172P0C7W6 258 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 LIG1P18858 919 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 PTH1RQ03431 593 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 GPATCH11Q8N954 259 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 UBXN4Q92575 508 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 PACS2Q86VP3 889 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
SYNE3-203ENST00000554873 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
SYNE3-203ENST00000554873 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
SYNE3-203ENST00000554873 ANXA1P04083 346 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 ACTN2P35609 894 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms