RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 TTLL11Q8NHH1 800 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
MTHFD1-209ENST00000554768 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
MTHFD1-209ENST00000554768 GRIPAP1Q4V328 841 aa16.37■□□□□ 0.21
MTHFD1-209ENST00000554768 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
MTHFD1-209ENST00000554768 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 GRM8O00222 908 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 BCAR3O75815 825 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 CTSWP56202 376 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-209ENST00000554768 CHD4Q14839 1912 aa16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 CSF1RP07333 972 aa16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 PSMD1Q99460 953 aa16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
MTHFD1-209ENST00000554768 FOXO4P98177 505 aa16.34■□□□□ 0.21
MTHFD1-209ENST00000554768 GREM2Q9H772 168 aa16.34■□□□□ 0.21
MTHFD1-209ENST00000554768 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
MTHFD1-209ENST00000554768 UTYO14607 1347 aa16.34■□□□□ 0.21
MTHFD1-209ENST00000554768 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
MTHFD1-209ENST00000554768 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
MTHFD1-209ENST00000554768 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
MTHFD1-209ENST00000554768 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 EPHA10Q5JZY3 1008 aa16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 KAZALD1Q96I82 304 aa16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-209ENST00000554768 LAMB2P55268 1798 aa16.31■□□□□ 0.2
MTHFD1-209ENST00000554768 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
MTHFD1-209ENST00000554768 MPNDQ8N594 471 aa16.31■□□□□ 0.2
MTHFD1-209ENST00000554768 COL4A1P02462 1669 aa16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 ZNF526Q8TF50 670 aaPredicted RBP16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
MTHFD1-209ENST00000554768 TRIM27P14373 513 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 ITGA6P23229 1130 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 GPSM2P81274 684 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 ATF7IPQ6VMQ6 1270 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
MTHFD1-209ENST00000554768 SUPT20HQ8NEM7 779 aa16.28■□□□□ 0.2
MTHFD1-209ENST00000554768 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
MTHFD1-209ENST00000554768 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-209ENST00000554768 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
MTHFD1-209ENST00000554768 SBF1O95248 1867 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 GLTPD2A6NH11 291 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 MINPP1Q9UNW1 487 aa16.27■□□□□ 0.2
MTHFD1-209ENST00000554768 ANKRD18BA2A2Z9 1011 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 FZD9O00144 591 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 LARGE2Q8N3Y3 721 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 BICC1Q9H694 974 aaKnown RBP16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 TAF1P21675 1872 aa16.26■□□□□ 0.19
MTHFD1-209ENST00000554768 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 IGHMBP2P38935 993 aaKnown RBP16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 AOC3Q16853 763 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 CHMP3Q9Y3E7 222 aa16.25■□□□□ 0.19
MTHFD1-209ENST00000554768 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
MTHFD1-209ENST00000554768 MPHOSPH8Q99549 860 aa16.24■□□□□ 0.19
MTHFD1-209ENST00000554768 NMRK2Q9NPI5 230 aa16.24■□□□□ 0.19
MTHFD1-209ENST00000554768 XDHP47989 1333 aa16.23■□□□□ 0.19
MTHFD1-209ENST00000554768 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
MTHFD1-209ENST00000554768 UBTFL1P0CB47 393 aaPredicted RBP16.23■□□□□ 0.19
MTHFD1-209ENST00000554768 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
MTHFD1-209ENST00000554768 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms