RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 OFD1O75665 1012 aa18.69■□□□□ 0.58
ARHGEF40-203ENST00000554514 RPS6KB1P23443 525 aa18.69■□□□□ 0.58
ARHGEF40-203ENST00000554514 LRRC2Q9BYS8 371 aa18.69■□□□□ 0.58
ARHGEF40-203ENST00000554514 TAF5LO75529 589 aa18.68■□□□□ 0.58
ARHGEF40-203ENST00000554514 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
ARHGEF40-203ENST00000554514 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-203ENST00000554514 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
ARHGEF40-203ENST00000554514 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
ARHGEF40-203ENST00000554514 TMEM94Q12767 1356 aa18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 TFIP11Q9UBB9 837 aaKnown RBP18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 ZNF330Q9Y3S2 320 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 MED23Q9ULK4 1368 aa18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 FOSBP53539 338 aa18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 TOB2Q14106 344 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF40-203ENST00000554514 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 COL15A1P39059 1388 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 CAMK4Q16566 473 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 ATP5JP18859 108 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 TTLL7Q6ZT98 887 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
ARHGEF40-203ENST00000554514 FGD1P98174 961 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 JAK2O60674 1132 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 ADCY5O95622 1261 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
ARHGEF40-203ENST00000554514 TIMM10P62072 90 aa18.64■□□□□ 0.58
ARHGEF40-203ENST00000554514 ANKRD1Q15327 319 aa18.64■□□□□ 0.58
ARHGEF40-203ENST00000554514 GOLIM4O00461 696 aa18.64■□□□□ 0.57
ARHGEF40-203ENST00000554514 ZNF500O60304 480 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF40-203ENST00000554514 A1BGP04217 495 aa18.64■□□□□ 0.57
ARHGEF40-203ENST00000554514 KRT85P78386 507 aa18.64■□□□□ 0.57
ARHGEF40-203ENST00000554514 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF40-203ENST00000554514 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 ZNF609O15014 1411 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 Q6ZUG5 572 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 PLBD2Q8NHP8 589 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 NEK1Q96PY6 1258 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.574e-7■□□□□ 8.7
ARHGEF40-203ENST00000554514 LETM1O95202 739 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
ARHGEF40-203ENST00000554514 MST1RQ04912 1400 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 SNRKQ9NRH2 765 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 HMG20BQ9P0W2 317 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 ADAMTS7Q9UKP4 1686 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 GOLGA6L4A6NEF3 574 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 LIG1P18858 919 aa18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 TTC12Q9H892 705 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF40-203ENST00000554514 KIF1AQ12756 1690 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 TPM2P07951 284 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 CYP21A2P08686 494 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 PDCP20941 246 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 ADAMTSL3P82987 1691 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 ALS2Q96Q42 1657 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 CKAP2LQ8IYA6 745 aa18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 C17orf53Q8N3J3 647 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF40-203ENST00000554514 RBM10P98175 930 aaKnown RBP18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 BRF1Q92994 677 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 LRRC24Q50LG9 513 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 DNTTIP2Q5QJE6 756 aaKnown RBP18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 SPATA32Q96LK8 384 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 HAUS7Q99871 368 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 CASP7P55210 303 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 PRDM11Q9NQV5 511 aa18.6■□□□□ 0.57
ARHGEF40-203ENST00000554514 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 FOXO4P98177 505 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 UVSSAQ2YD98 709 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 CWC25Q9NXE8 425 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 H3BQV1 296 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 KRT32Q14532 448 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 IFFO2Q5TF58 517 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 SPC24Q8NBT2 197 aa18.59■□□□□ 0.57
ARHGEF40-203ENST00000554514 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
ARHGEF40-203ENST00000554514 CHST3Q7LGC8 479 aa18.58■□□□□ 0.57
ARHGEF40-203ENST00000554514 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.57
ARHGEF40-203ENST00000554514 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
ARHGEF40-203ENST00000554514 PAG1Q9NWQ8 432 aa18.58■□□□□ 0.56
ARHGEF40-203ENST00000554514 DACT1Q9NYF0 836 aa18.58■□□□□ 0.56
ARHGEF40-203ENST00000554514 KDM4AO75164 1064 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 MCM5P33992 734 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 KBTBD3Q8NAB2 608 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 GTF3C6Q969F1 213 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms