RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
PRKCH-207ENST00000553831 TAF1P21675 1872 aa18.16■□□□□ 0.5
PRKCH-207ENST00000553831 F6X3S4 739 aa18.15■□□□□ 0.5
PRKCH-207ENST00000553831 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
PRKCH-207ENST00000553831 CELF1Q92879 486 aaKnown RBP18.15■□□□□ 0.5
PRKCH-207ENST00000553831 CDHR2Q9BYE9 1310 aa18.15■□□□□ 0.5
PRKCH-207ENST00000553831 PDE8AO60658 829 aa18.14■□□□□ 0.49
PRKCH-207ENST00000553831 GRIPAP1Q4V328 841 aa18.14■□□□□ 0.49
PRKCH-207ENST00000553831 SP8Q8IXZ3 490 aa18.14■□□□□ 0.49
PRKCH-207ENST00000553831 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
PRKCH-207ENST00000553831 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
PRKCH-207ENST00000553831 COL4A5P29400 1685 aa18.13■□□□□ 0.49
PRKCH-207ENST00000553831 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
PRKCH-207ENST00000553831 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
PRKCH-207ENST00000553831 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 GCKRQ14397 625 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 CCDC85AQ96PX6 553 aaPredicted RBP18.12■□□□□ 0.49
PRKCH-207ENST00000553831 SEC31BQ9NQW1 1179 aa18.12■□□□□ 0.49
PRKCH-207ENST00000553831 H7C1W4 665 aa18.11■□□□□ 0.49
PRKCH-207ENST00000553831 CTSWP56202 376 aa18.11■□□□□ 0.49
PRKCH-207ENST00000553831 DPP8Q6V1X1 898 aaPredicted RBP18.11■□□□□ 0.49
PRKCH-207ENST00000553831 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
PRKCH-207ENST00000553831 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
PRKCH-207ENST00000553831 WDR90Q96KV7 1748 aa18.11■□□□□ 0.49
PRKCH-207ENST00000553831 DUOX1Q9NRD9 1551 aa18.1■□□□□ 0.49
PRKCH-207ENST00000553831 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
PRKCH-207ENST00000553831 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
PRKCH-207ENST00000553831 LARGE2Q8N3Y3 721 aa18.1■□□□□ 0.49
PRKCH-207ENST00000553831 MPNDQ8N594 471 aa18.1■□□□□ 0.49
PRKCH-207ENST00000553831 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
PRKCH-207ENST00000553831 RTFDC1Q9BY42 306 aaPredicted RBP18.1■□□□□ 0.49
PRKCH-207ENST00000553831 FZD9O00144 591 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 TOMM70O94826 608 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 CASP7P55210 303 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 RPS8P62241 208 aaKnown RBP18.09■□□□□ 0.49
PRKCH-207ENST00000553831 C16orf71Q8IYS4 520 aaPredicted RBP18.09■□□□□ 0.49
PRKCH-207ENST00000553831 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 BCL2L13Q9BXK5 485 aa18.09■□□□□ 0.49
PRKCH-207ENST00000553831 POTECB2RU33 542 aa18.08■□□□□ 0.48
PRKCH-207ENST00000553831 AOC3Q16853 763 aa18.08■□□□□ 0.48
PRKCH-207ENST00000553831 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.48
PRKCH-207ENST00000553831 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.48
PRKCH-207ENST00000553831 MYH3P11055 1940 aa18.08■□□□□ 0.48
PRKCH-207ENST00000553831 VEGFAP15692 232 aaPredicted RBP18.07■□□□□ 0.48
PRKCH-207ENST00000553831 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
PRKCH-207ENST00000553831 PLA2G12BQ9BX93 195 aa18.07■□□□□ 0.48
PRKCH-207ENST00000553831 GREM2Q9H772 168 aa18.07■□□□□ 0.48
PRKCH-207ENST00000553831 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
PRKCH-207ENST00000553831 GPSM2P81274 684 aa18.06■□□□□ 0.48
PRKCH-207ENST00000553831 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRKCH-207ENST00000553831 ALDH1L2Q3SY69 923 aa18.06■□□□□ 0.48
PRKCH-207ENST00000553831 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
PRKCH-207ENST00000553831 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
PRKCH-207ENST00000553831 LTBP1Q14766 1721 aa18.06■□□□□ 0.48
PRKCH-207ENST00000553831 PTPRCP08575 1304 aa18.05■□□□□ 0.48
PRKCH-207ENST00000553831 CT47B1P0C2W7 299 aaPredicted RBP18.05■□□□□ 0.48
PRKCH-207ENST00000553831 EIF6P56537 245 aaKnown RBP18.05■□□□□ 0.48
PRKCH-207ENST00000553831 KIAA2012Q0VF49 1180 aa18.05■□□□□ 0.48
PRKCH-207ENST00000553831 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
PRKCH-207ENST00000553831 L3MBTL3Q96JM7 780 aaPredicted RBP18.05■□□□□ 0.48
PRKCH-207ENST00000553831 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
PRKCH-207ENST00000553831 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
PRKCH-207ENST00000553831 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
PRKCH-207ENST00000553831 ALDH1L1O75891 902 aa18.04■□□□□ 0.48
PRKCH-207ENST00000553831 FAM161AQ3B820 660 aa18.04■□□□□ 0.48
PRKCH-207ENST00000553831 CDC5LQ99459 802 aaKnown RBP18.04■□□□□ 0.48
PRKCH-207ENST00000553831 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
PRKCH-207ENST00000553831 GRM8O00222 908 aa18.03■□□□□ 0.48
PRKCH-207ENST00000553831 GPC2Q8N158 579 aa18.03■□□□□ 0.48
PRKCH-207ENST00000553831 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
PRKCH-207ENST00000553831 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
PRKCH-207ENST00000553831 CSF1RP07333 972 aa18.02■□□□□ 0.48
PRKCH-207ENST00000553831 GPR101Q96P66 508 aaPredicted RBP18.02■□□□□ 0.48
PRKCH-207ENST00000553831 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
PRKCH-207ENST00000553831 GJA3Q9Y6H8 435 aa18.02■□□□□ 0.48
PRKCH-207ENST00000553831 SPEF2Q9C093 1822 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 IQCA1LA6NCM1 817 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 HSPA6P17066 643 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 ITGA6P23229 1130 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-207ENST00000553831 ZNRF3Q9ULT6 936 aa18.01■□□□□ 0.47
PRKCH-207ENST00000553831 SCN4AP35499 1836 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 UFL1O94874 794 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 FOXO4P98177 505 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 FSTL1Q12841 308 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 WASHC4Q2M389 1173 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 SMC1BQ8NDV3 1235 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
PRKCH-207ENST00000553831 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
PRKCH-207ENST00000553831 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 GGA1Q9UJY5 639 aa18■□□□□ 0.47
PRKCH-207ENST00000553831 XDHP47989 1333 aa17.99■□□□□ 0.47
PRKCH-207ENST00000553831 RIMBP2O15034 1052 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms