RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 CAMKK2Q96RR4 588 aa21.67■■□□□ 1.06
PSEN1-206ENST00000553447 NYXQ9GZU5 481 aa21.67■■□□□ 1.06
PSEN1-206ENST00000553447 OSBPL3Q9H4L5 887 aa21.67■■□□□ 1.06
PSEN1-206ENST00000553447 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
PSEN1-206ENST00000553447 BMP2KLQ5H9B9 411 aa21.66■■□□□ 1.06
PSEN1-206ENST00000553447 CLASRPQ8N2M8 674 aaKnown RBP21.66■■□□□ 1.06
PSEN1-206ENST00000553447 CCDC85AQ96PX6 553 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-206ENST00000553447 GREM2Q9H772 168 aa21.66■■□□□ 1.06
PSEN1-206ENST00000553447 TFCP2L1Q9NZI6 479 aa21.66■■□□□ 1.06
PSEN1-206ENST00000553447 SPEF2Q9C093 1822 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 CIAO1O76071 339 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 GYS1P13807 737 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 MX1P20591 662 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 PDE1AP54750 535 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 EN1Q05925 392 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-206ENST00000553447 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
PSEN1-206ENST00000553447 ERFEQ4G0M1 354 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 TTC22Q5TAA0 569 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-206ENST00000553447 STAP2Q9UGK3 403 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 LRP5O75197 1615 aa21.65■■□□□ 1.06
PSEN1-206ENST00000553447 CARMIL3Q8ND23 1372 aa21.64■■□□□ 1.06
PSEN1-206ENST00000553447 ANKRD18BA2A2Z9 1011 aa21.64■■□□□ 1.05
PSEN1-206ENST00000553447 EYA2O00167 538 aa21.64■■□□□ 1.05
PSEN1-206ENST00000553447 ITGA6P23229 1130 aa21.64■■□□□ 1.05
PSEN1-206ENST00000553447 SF3B2Q13435 895 aaKnown RBP21.64■■□□□ 1.05
PSEN1-206ENST00000553447 SLC10A5Q5PT55 438 aa21.64■■□□□ 1.05
PSEN1-206ENST00000553447 FBXO3Q9UK99 471 aa21.64■■□□□ 1.05
PSEN1-206ENST00000553447 RTL9Q8NET4 1388 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 AOX1Q06278 1338 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 IL15P40933 162 aaPredicted RBP21.63■■□□□ 1.05
PSEN1-206ENST00000553447 NFIXQ14938 502 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 TAF7LQ5H9L4 462 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 ATG9AQ7Z3C6 839 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 NBPF5PQ86XG9 351 aaPredicted RBP21.63■■□□□ 1.05
PSEN1-206ENST00000553447 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
PSEN1-206ENST00000553447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.63■■□□□ 1.05
PSEN1-206ENST00000553447 ABCC12Q96J65 1359 aa21.62■■□□□ 1.05
PSEN1-206ENST00000553447 GSPT1P15170 499 aaKnown RBP21.62■■□□□ 1.05
PSEN1-206ENST00000553447 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
PSEN1-206ENST00000553447 BAG6P46379 1132 aa21.62■■□□□ 1.05
PSEN1-206ENST00000553447 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
PSEN1-206ENST00000553447 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
PSEN1-206ENST00000553447 TNRC6CQ9HCJ0 1690 aaKnown RBP21.61■■□□□ 1.05
PSEN1-206ENST00000553447 TFCP2Q12800 502 aa21.61■■□□□ 1.05
PSEN1-206ENST00000553447 CCDC152Q4G0S7 254 aa21.61■■□□□ 1.05
PSEN1-206ENST00000553447 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
PSEN1-206ENST00000553447 AACSQ86V21 672 aa21.61■■□□□ 1.05
PSEN1-206ENST00000553447 COL23A1Q86Y22 540 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-206ENST00000553447 IFIT2P09913 472 aaKnown RBP21.6■■□□□ 1.05
PSEN1-206ENST00000553447 EAF2Q96CJ1 260 aaPredicted RBP21.6■■□□□ 1.05
PSEN1-206ENST00000553447 PUS3Q9BZE2 481 aaKnown RBP21.6■■□□□ 1.05
PSEN1-206ENST00000553447 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
PSEN1-206ENST00000553447 TM4SF1P30408 202 aa21.59■■□□□ 1.05
PSEN1-206ENST00000553447 SF3B3Q15393 1217 aaKnown RBP21.59■■□□□ 1.05
PSEN1-206ENST00000553447 TSHZ3Q63HK5 1081 aa21.59■■□□□ 1.05
PSEN1-206ENST00000553447 TTC41PQ6P2S7 1318 aa21.58■■□□□ 1.05
PSEN1-206ENST00000553447 TNNI3KQ59H18 835 aa21.58■■□□□ 1.05
PSEN1-206ENST00000553447 GPR108Q9NPR9 543 aa21.58■■□□□ 1.05
PSEN1-206ENST00000553447 FPGT-TNNI3KV9GXZ4 949 aa21.58■■□□□ 1.05
PSEN1-206ENST00000553447 RIC1Q4ADV7 1423 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 C3orf67Q6ZVT6 689 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 CCDC8Q9H0W5 538 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-206ENST00000553447 STK32BQ9NY57 414 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 TAF1P21675 1872 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 NRXN2Q9P2S2 1712 aa21.57■■□□□ 1.04
PSEN1-206ENST00000553447 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 ZNF609O15014 1411 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 MSH5O43196 834 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 SLC15A2Q16348 729 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 LDHAL6AQ6ZMR3 332 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 DEFB132Q7Z7B7 95 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 PI4K2BQ8TCG2 481 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 ANO8Q9HCE9 1232 aaPredicted RBP21.56■■□□□ 1.04
PSEN1-206ENST00000553447 SEC31BQ9NQW1 1179 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
PSEN1-206ENST00000553447 SDSP20132 328 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 NLRP3Q96P20 1036 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 CNNM1Q9NRU3 951 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 TLR7Q9NYK1 1049 aaKnown RBP21.55■■□□□ 1.04
PSEN1-206ENST00000553447 CEP126Q9P2H0 1117 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 RBM19Q9Y4C8 960 aaKnown RBP21.55■■□□□ 1.04
PSEN1-206ENST00000553447 RIPOR2Q9Y4F9 1068 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 COL4A1P02462 1669 aa21.55■■□□□ 1.04
PSEN1-206ENST00000553447 NPHP1O15259 732 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 SERPINB2P05120 415 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 DDR1Q08345 913 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 PRR5LQ6MZQ0 368 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 CCDC125Q86Z20 511 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 NLGN1Q8N2Q7 840 aa21.54■■□□□ 1.04
PSEN1-206ENST00000553447 ARAP2Q8WZ64 1704 aa21.53■■□□□ 1.04
PSEN1-206ENST00000553447 POLRMTO00411 1230 aaKnown RBP21.53■■□□□ 1.04
PSEN1-206ENST00000553447 ERC2O15083 957 aa21.53■■□□□ 1.04
PSEN1-206ENST00000553447 CDC45O75419 566 aa21.53■■□□□ 1.04
PSEN1-206ENST00000553447 GLRX3O76003 335 aaKnown RBP21.53■■□□□ 1.04
PSEN1-206ENST00000553447 CCDC24Q8N4L8 307 aa21.53■■□□□ 1.04
PSEN1-206ENST00000553447 CDC5LQ99459 802 aaKnown RBP21.53■■□□□ 1.04
PSEN1-206ENST00000553447 DBNLQ9UJU6 430 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms