RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
NRDE2-202ENST00000553409 PA2G4Q9UQ80 394 aaKnown RBP13.32□□□□□ -0.28
NRDE2-202ENST00000553409 KIF2AO00139 706 aaPredicted RBP13.32□□□□□ -0.28
NRDE2-202ENST00000553409 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
NRDE2-202ENST00000553409 SLC20A2Q08357 652 aa13.32□□□□□ -0.28
NRDE2-202ENST00000553409 CCAR1Q8IX12 1150 aaKnown RBP13.32□□□□□ -0.28
NRDE2-202ENST00000553409 GOLPH3LQ9H4A5 285 aa13.32□□□□□ -0.28
NRDE2-202ENST00000553409 ACEP12821 1306 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 ARHGAP29Q52LW3 1261 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 H3BQV1 296 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 PPP1R13BQ96KQ4 1090 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
NRDE2-202ENST00000553409 CRYBG1Q9Y4K1 1723 aa13.31□□□□□ -0.28
NRDE2-202ENST00000553409 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
NRDE2-202ENST00000553409 KDRP35968 1356 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 HTATSF1O43719 755 aaKnown RBP13.3□□□□□ -0.28
NRDE2-202ENST00000553409 AACSQ86V21 672 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 CTAGE5O15320 804 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 GSDMDP57764 484 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
NRDE2-202ENST00000553409 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
NRDE2-202ENST00000553409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.282e-9■■■■■ 36.9
NRDE2-202ENST00000553409 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
NRDE2-202ENST00000553409 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
NRDE2-202ENST00000553409 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
NRDE2-202ENST00000553409 POLR3GO15318 223 aaPredicted RBP13.29□□□□□ -0.28
NRDE2-202ENST00000553409 FOSBP53539 338 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
NRDE2-202ENST00000553409 ANXA1P04083 346 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
NRDE2-202ENST00000553409 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 CEP57L1Q8IYX8 460 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 NEK11Q8NG66 645 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 KINO60870 393 aaKnown RBP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
NRDE2-202ENST00000553409 SETD1AO15047 1707 aaKnown RBP13.28□□□□□ -0.28
NRDE2-202ENST00000553409 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.28
NRDE2-202ENST00000553409 BOLA2Q9H3K6 86 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 A2ML1A8K2U0 1454 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 OSCARQ8IYS5 282 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 ENGASEQ8NFI3 743 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 SNRKQ9NRH2 765 aa13.27□□□□□ -0.28
NRDE2-202ENST00000553409 FEZ2Q9UHY8 353 aaPredicted RBP13.27□□□□□ -0.28
NRDE2-202ENST00000553409 AKAP12Q02952 1782 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 HIP1O00291 1037 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 AMPHP49418 695 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.29
NRDE2-202ENST00000553409 FSD1Q9BTV5 496 aa13.27□□□□□ -0.29
NRDE2-202ENST00000553409 PSDA5PKW4 1024 aaPredicted RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 SMC2O95347 1197 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 MTX1Q13505 466 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 HOMER1Q86YM7 354 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 UBXN4Q92575 508 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 TLR7Q9NYK1 1049 aaKnown RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 FLT4P35916 1363 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
NRDE2-202ENST00000553409 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 LRRC2Q9BYS8 371 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 IFNKQ9P0W0 207 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 DNAI1Q9UI46 699 aa13.26□□□□□ -0.29
NRDE2-202ENST00000553409 ST5P78524 1137 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 Q6ZUG5 572 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 ZCCHC17Q9NP64 241 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms