RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRIM6-TRIM34B2RNG4 842 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 IFIT5Q13325 482 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 GREM2Q9H772 168 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 ERC2O15083 957 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 RXRBP28702 533 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 GPATCH3Q96I76 525 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 PUS3Q9BZE2 481 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 RGS17Q9UGC6 210 aaPredicted RBP23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 FBXO3Q9UK99 471 aa23.93■■□□□ 1.42
RBFOX1-215ENST00000553186 RILPL2Q969X0 211 aa23.92■■□□□ 1.42
RBFOX1-215ENST00000553186 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
RBFOX1-215ENST00000553186 CASC1Q6TDU7 716 aa23.92■■□□□ 1.42
RBFOX1-215ENST00000553186 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
RBFOX1-215ENST00000553186 SCN7AQ01118 1682 aa23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 ITGA6P23229 1130 aa23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 SLC27A3Q5K4L6 730 aa23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 USPL1Q5W0Q7 1092 aa23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 SRP68Q9UHB9 627 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 DBNLQ9UJU6 430 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 HCLS1P14317 486 aaPredicted RBP23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
RBFOX1-215ENST00000553186 RBM25P49756 843 aaKnown RBP23.9■■□□□ 1.42
RBFOX1-215ENST00000553186 DDRGK1Q96HY6 314 aa23.9■■□□□ 1.42
RBFOX1-215ENST00000553186 GPR108Q9NPR9 543 aa23.9■■□□□ 1.42
RBFOX1-215ENST00000553186 MAP4K4O95819 1239 aaPredicted RBP23.89■■□□□ 1.42
RBFOX1-215ENST00000553186 TBC1D9BQ66K14 1250 aa23.89■■□□□ 1.42
RBFOX1-215ENST00000553186 EIF5BO60841 1220 aaKnown RBP23.89■■□□□ 1.41
RBFOX1-215ENST00000553186 CHMLP26374 656 aa23.89■■□□□ 1.41
RBFOX1-215ENST00000553186 ZPR1O75312 459 aa23.88■■□□□ 1.41
RBFOX1-215ENST00000553186 ANKRD18BA2A2Z9 1011 aa23.88■■□□□ 1.41
RBFOX1-215ENST00000553186 PROM2Q8N271 834 aa23.88■■□□□ 1.41
RBFOX1-215ENST00000553186 TAF7LQ5H9L4 462 aa23.87■■□□□ 1.41
RBFOX1-215ENST00000553186 CNTROBQ8N137 903 aa23.87■■□□□ 1.41
RBFOX1-215ENST00000553186 MYH3P11055 1940 aa23.87■■□□□ 1.41
RBFOX1-215ENST00000553186 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
RBFOX1-215ENST00000553186 DBNDD2Q9BQY9 259 aa23.86■■□□□ 1.41
RBFOX1-215ENST00000553186 RIPOR2Q9Y4F9 1068 aa23.86■■□□□ 1.41
RBFOX1-215ENST00000553186 HSP90B1P14625 803 aaKnown RBP23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 PHF14O94880 888 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 ADRA2BP18089 450 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 TXNRD1Q16881 649 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 BICDL1Q6ZP65 573 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 ESYT1Q9BSJ8 1104 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 CEP126Q9P2H0 1117 aa23.85■■□□□ 1.41
RBFOX1-215ENST00000553186 ATP5JP18859 108 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 TIMM10P62072 90 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 LDHAL6AQ6ZMR3 332 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 USP26Q9BXU7 913 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 DDX60Q8IY21 1712 aaKnown RBP23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 ZNF609O15014 1411 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 RFC4P35249 363 aa23.84■■□□□ 1.41
RBFOX1-215ENST00000553186 ERFEQ4G0M1 354 aa23.83■■□□□ 1.41
RBFOX1-215ENST00000553186 SETDB2Q96T68 719 aa23.83■■□□□ 1.41
RBFOX1-215ENST00000553186 BOLA2Q9H3K6 86 aa23.83■■□□□ 1.41
RBFOX1-215ENST00000553186 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 PLSCR1O15162 318 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 EVI5LQ96CN4 794 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 A0A1B0GUL7 405 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 REC8O95072 547 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 C4AP0C0L4 1744 aa23.82■■□□□ 1.4
RBFOX1-215ENST00000553186 CCDC152Q4G0S7 254 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 NEUROD6Q96NK8 337 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 KIF2CQ99661 725 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 LAMB2P55268 1798 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 LRP5O75197 1615 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 SLC10A5Q5PT55 438 aa23.81■■□□□ 1.4
RBFOX1-215ENST00000553186 VGLL2Q8N8G2 317 aa23.8■■□□□ 1.4
RBFOX1-215ENST00000553186 IL25Q9H293 177 aa23.8■■□□□ 1.4
RBFOX1-215ENST00000553186 SEC31BQ9NQW1 1179 aa23.8■■□□□ 1.4
RBFOX1-215ENST00000553186 AKAP2Q9Y2D5 859 aa23.8■■□□□ 1.4
RBFOX1-215ENST00000553186 NYXQ9GZU5 481 aa23.79■■□□□ 1.4
RBFOX1-215ENST00000553186 CNNM1Q9NRU3 951 aa23.79■■□□□ 1.4
RBFOX1-215ENST00000553186 COL24A1Q17RW2 1714 aa23.79■■□□□ 1.4
RBFOX1-215ENST00000553186 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
RBFOX1-215ENST00000553186 C3orf67Q6ZVT6 689 aa23.79■■□□□ 1.4
RBFOX1-215ENST00000553186 APBA3O96018 575 aa23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 SSFA2P28290 1259 aa23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 SF3B3Q15393 1217 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 METTL24Q5JXM2 366 aa23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 ABCC12Q96J65 1359 aa23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 NBPF5PQ86XG9 351 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-215ENST00000553186 HAUS7Q99871 368 aa23.77■■□□□ 1.4
RBFOX1-215ENST00000553186 HMGB2P26583 209 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-215ENST00000553186 AK9Q5TCS8 1911 aa23.76■■□□□ 1.39
RBFOX1-215ENST00000553186 SGSM2O43147 1006 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 GTF2E1P29083 439 aaPredicted RBP23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 SLC4A3P48751 1232 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 NFIXQ14938 502 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 TPTE2Q6XPS3 522 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 EDC3Q96F86 508 aaKnown RBP23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 PDE8BO95263 885 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 ADORA1P30542 326 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 XAGE2Q96GT9 111 aa23.75■■□□□ 1.39
RBFOX1-215ENST00000553186 MROH5Q6ZUA9 1318 aa23.74■■□□□ 1.39
RBFOX1-215ENST00000553186 GYS1P13807 737 aa23.74■■□□□ 1.39
RBFOX1-215ENST00000553186 ATP2B3Q16720 1220 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms