RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 ATP5JP18859 108 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 CTSWP56202 376 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 CCDC57Q2TAC2 916 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 DDX60Q8IY21 1712 aaKnown RBP13.21□□□□□ -0.29
PFDN5-216ENST00000552341 SGSM2O43147 1006 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 CD2BP2O95400 341 aaKnown RBP13.21□□□□□ -0.29
PFDN5-216ENST00000552341 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
PFDN5-216ENST00000552341 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 DBNDD2Q9BQY9 259 aa13.21□□□□□ -0.29
PFDN5-216ENST00000552341 ZNF609O15014 1411 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
PFDN5-216ENST00000552341 PDE8AO60658 829 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 GREM2Q9H772 168 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 SCN7AQ01118 1682 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 LAMB2P55268 1798 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
PFDN5-216ENST00000552341 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 AK7Q96M32 723 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-216ENST00000552341 BOLA2Q9H3K6 86 aa13.2□□□□□ -0.3
PFDN5-216ENST00000552341 LRP5O75197 1615 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 NTSR2O95665 410 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 ITGA6P23229 1130 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 TIMM10P62072 90 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 PARP10Q53GL7 1025 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
PFDN5-216ENST00000552341 RGL2O15211 777 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 RABEP1Q15276 862 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
PFDN5-216ENST00000552341 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
PFDN5-216ENST00000552341 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
PFDN5-216ENST00000552341 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
PFDN5-216ENST00000552341 NIP7Q9Y221 180 aaKnown RBP eCLIP13.18□□□□□ -0.3
PFDN5-216ENST00000552341 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
PFDN5-216ENST00000552341 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
PFDN5-216ENST00000552341 HAUS7Q99871 368 aa13.17□□□□□ -0.3
PFDN5-216ENST00000552341 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-216ENST00000552341 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-216ENST00000552341 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
PFDN5-216ENST00000552341 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 RAD50Q92878 1312 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-216ENST00000552341 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
PFDN5-216ENST00000552341 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 ANKRD18BA2A2Z9 1011 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 ANAPC15P60006 121 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 NDUFB9Q9Y6M9 179 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
PFDN5-216ENST00000552341 HSPA4P34932 840 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
PFDN5-216ENST00000552341 C4AP0C0L4 1744 aa13.15□□□□□ -0.31
PFDN5-216ENST00000552341 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.31
PFDN5-216ENST00000552341 RTL9Q8NET4 1388 aa13.15□□□□□ -0.31
PFDN5-216ENST00000552341 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 HIP1O00291 1037 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-216ENST00000552341 GNPATO15228 680 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 DDIT3P35638 169 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-216ENST00000552341 NBR1Q14596 966 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 COL4A1P02462 1669 aa13.14□□□□□ -0.31
PFDN5-216ENST00000552341 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-216ENST00000552341 ADORA1P30542 326 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 PTH1RQ03431 593 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
PFDN5-216ENST00000552341 MED23Q9ULK4 1368 aa13.13□□□□□ -0.31
PFDN5-216ENST00000552341 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
PFDN5-216ENST00000552341 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms