RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
CHPT1-207ENST00000552213 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
CHPT1-207ENST00000552213 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
CHPT1-207ENST00000552213 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
CHPT1-207ENST00000552213 BBOX1O75936 387 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 GRAPQ13588 217 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
CHPT1-207ENST00000552213 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
CHPT1-207ENST00000552213 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
CHPT1-207ENST00000552213 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
CHPT1-207ENST00000552213 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
CHPT1-207ENST00000552213 MS4A1P11836 297 aa16.52■□□□□ 0.24
CHPT1-207ENST00000552213 TMEM57Q8N5G2 664 aa16.52■□□□□ 0.24
CHPT1-207ENST00000552213 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
CHPT1-207ENST00000552213 UTYO14607 1347 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
CHPT1-207ENST00000552213 CDC5LQ99459 802 aaKnown RBP16.51■□□□□ 0.23
CHPT1-207ENST00000552213 GREM2Q9H772 168 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
CHPT1-207ENST00000552213 PLIN1O60240 522 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
CHPT1-207ENST00000552213 FOXO4P98177 505 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 ITPRIPQ8IWB1 547 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 DLEC1Q9Y238 1755 aa16.5■□□□□ 0.23
CHPT1-207ENST00000552213 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
CHPT1-207ENST00000552213 CSF1RP07333 972 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 GNAI3P08754 354 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 ITGA6P23229 1130 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 MEIS3Q99687 375 aa16.49■□□□□ 0.23
CHPT1-207ENST00000552213 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
CHPT1-207ENST00000552213 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
CHPT1-207ENST00000552213 ANKRD18BA2A2Z9 1011 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 RLBP1P12271 317 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
CHPT1-207ENST00000552213 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
CHPT1-207ENST00000552213 RTL9Q8NET4 1388 aa16.48■□□□□ 0.23
CHPT1-207ENST00000552213 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
CHPT1-207ENST00000552213 RASSF7Q02833 373 aa16.47■□□□□ 0.23
CHPT1-207ENST00000552213 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
CHPT1-207ENST00000552213 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
CHPT1-207ENST00000552213 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
CHPT1-207ENST00000552213 LAMB2P55268 1798 aa16.46■□□□□ 0.23
CHPT1-207ENST00000552213 NFKBIEO00221 500 aa16.46■□□□□ 0.23
CHPT1-207ENST00000552213 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
CHPT1-207ENST00000552213 LRRFIP2Q9Y608 721 aaKnown RBP16.46■□□□□ 0.23
CHPT1-207ENST00000552213 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHPT1-207ENST00000552213 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
CHPT1-207ENST00000552213 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
CHPT1-207ENST00000552213 SLC51AQ86UW1 340 aa16.45■□□□□ 0.22
CHPT1-207ENST00000552213 GNAI2P04899 355 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 LMNB1P20700 586 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 C9orf131Q5VYM1 1079 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 MPNDQ8N594 471 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 RNF181Q9P0P0 153 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
CHPT1-207ENST00000552213 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
CHPT1-207ENST00000552213 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
CHPT1-207ENST00000552213 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
CHPT1-207ENST00000552213 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
CHPT1-207ENST00000552213 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
CHPT1-207ENST00000552213 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
CHPT1-207ENST00000552213 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
CHPT1-207ENST00000552213 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
CHPT1-207ENST00000552213 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
CHPT1-207ENST00000552213 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
CHPT1-207ENST00000552213 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
CHPT1-207ENST00000552213 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
CHPT1-207ENST00000552213 PSMD1Q99460 953 aa16.42■□□□□ 0.22
CHPT1-207ENST00000552213 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
CHPT1-207ENST00000552213 C6orf229H3BNL8 230 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
CHPT1-207ENST00000552213 YY1P25490 414 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 GPSM2P81274 684 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 LDHAL6AQ6ZMR3 332 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
CHPT1-207ENST00000552213 UTRNP46939 3433 aa16.4■□□□□ 0.22
CHPT1-207ENST00000552213 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms