RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CDK2AP1O14519 115 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 C21orf2O43822 256 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 IL2RAP01589 272 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 PTGIRP43119 386 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 EPHA4P54764 986 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 MARSP56192 900 aaKnown RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 PSMA6P60900 246 aaKnown RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 CBLBQ13191 982 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 ZNF211Q13398 564 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 MTFR1Q15390 333 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 TLR1Q15399 786 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 Q6ZVU0 165 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 SLC9A9Q8IVB4 645 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 STAG2Q8N3U4 1231 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 NBPF15Q8N660 670 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 ITPKCQ96DU7 683 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 PKD2L1Q9P0L9 805 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 SCHIP1Q9P0W5 487 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 SEPT3Q9UH03 358 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 METP08581 1390 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 PIK3R4Q99570 1358 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 JCADQ9P266 1359 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 RPRD2Q5VT52 1461 aaKnown RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 PIK3C2BO00750 1634 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 MST1RQ04912 1400 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 SPATA31A6Q5VVP1 1343 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 J3QL48 77 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 GDF9O60383 454 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 FAM13AO94988 1023 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 RBM25P49756 843 aaKnown RBP3.69□□□□□ -1.82
CPSF6-207ENST00000551516 FOXK2Q01167 660 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 CENPCQ03188 943 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 CLN3Q13286 438 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 TBCELQ5QJ74 424 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 PURBQ96QR8 312 aaKnown RBP3.69□□□□□ -1.82
CPSF6-207ENST00000551516 C19orf44Q9H6X5 657 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 CABP1Q9NZU7 370 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 DNMT3AQ9Y6K1 912 aaPredicted RBP3.69□□□□□ -1.82
CPSF6-207ENST00000551516 TMEM131LA2VDJ0 1609 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 NRXN3Q9Y4C0 1643 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 DCCP43146 1447 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 RIMS2Q9UQ26 1411 aa3.69□□□□□ -1.82
CPSF6-207ENST00000551516 SOS2Q07890 1332 aaPredicted RBP3.69□□□□□ -1.82
CPSF6-207ENST00000551516 ROBO1Q9Y6N7 1651 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 BCL9LQ86UU0 1499 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 PNPLA6Q8IY17 1366 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 SERTM1A2A2V5 107 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 TNFRSF10AO00220 468 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 UPP2O95045 317 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 TIMP2P16035 220 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 NOS2P35228 1153 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 RELBQ01201 579 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 AAMPQ13685 434 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 SLC27A3Q5K4L6 730 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ALKBH2Q6NS38 261 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 TMEM214Q6NUQ4 689 aaKnown RBP3.68□□□□□ -1.82
CPSF6-207ENST00000551516 C16orf46Q6P387 395 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 CAPN12Q6ZSI9 719 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 HELQQ8TDG4 1101 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 AGBL1Q96MI9 1066 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ZSCAN10Q96SZ4 725 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-207ENST00000551516 C2orf49Q9BVC5 232 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-207ENST00000551516 KLF16Q9BXK1 252 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ZNF395Q9H8N7 513 aaPredicted RBP3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ZFAND3Q9H8U3 227 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 TOR4AQ9NXH8 423 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 DCTN4Q9UJW0 460 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ZNF232Q9UNY5 417 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 HRH3Q9Y5N1 445 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 LAMC1P11047 1609 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ADGRB3O60242 1522 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 RGS12O14924 1447 aa3.68□□□□□ -1.82
CPSF6-207ENST00000551516 ROCK1Q13464 1354 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 E9PSI1 815 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 BRD2P25440 801 aaKnown RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 MAPK1P28482 360 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 GPC1P35052 558 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PRR20EP86478 221 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PRR20CP86479 221 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PRR20DP86480 221 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PRR20BP86481 221 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PRR20AP86496 221 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 MTMR3Q13615 1198 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 TEAD4Q15561 434 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 PPARGC1BQ86YN6 1023 aaKnown RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 ZSCAN29Q8IWY8 852 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 ABTB2Q8N961 1025 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 KDF1Q8NAX2 398 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 DDX17Q92841 729 aaKnown RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 NGLY1Q96IV0 654 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 TSEN34Q9BSV6 310 aaKnown RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 NIFKQ9BYG3 293 aaKnown RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 IQSEC3Q9UPP2 1182 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-207ENST00000551516 ANKRD50Q9ULJ7 1429 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 MYOM2P54296 1465 aa3.67□□□□□ -1.82
CPSF6-207ENST00000551516 CHD2O14647 1828 aaKnown RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 ANKRD33BA6NCL7 494 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 CAPN5O15484 640 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 NDUFB5O43674 189 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 NPR3P17342 541 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms