RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 YDJCA8MPS7 323 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 APAF1O14727 1248 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 HSP90AB3PQ58FF7 597 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 ANKRD13DQ6ZTN6 518 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 PLBD2Q8NHP8 589 aa15.08■□□□□ 0
PRPF40B-212ENST00000551111 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 BBOX1O75936 387 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 ZNF853P0CG23 659 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 GRAPQ13588 217 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 CST9Q5W186 159 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 DPP8Q6V1X1 898 aaPredicted RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 MPNDQ8N594 471 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 GRAPLQ8TC17 118 aaPredicted RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 CELF1Q92879 486 aaKnown RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 CFAP44Q96MT7 982 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 PHAXQ9H814 394 aaKnown RBP15.07■□□□□ 0
PRPF40B-212ENST00000551111 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
PRPF40B-212ENST00000551111 RASSF10A6NK89 507 aa15.06■□□□□ 0
PRPF40B-212ENST00000551111 RAD17O75943 681 aa15.06■□□□□ 0
PRPF40B-212ENST00000551111 GMPSP49915 693 aaPredicted RBP15.06■□□□□ 0
PRPF40B-212ENST00000551111 DEFB115Q30KQ5 88 aa15.06■□□□□ 0
PRPF40B-212ENST00000551111 CCDC184Q52MB2 194 aa15.06■□□□□ 0
PRPF40B-212ENST00000551111 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
PRPF40B-212ENST00000551111 ZNRF3Q9ULT6 936 aa15.06■□□□□ 0
PRPF40B-212ENST00000551111 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
PRPF40B-212ENST00000551111 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
PRPF40B-212ENST00000551111 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
PRPF40B-212ENST00000551111 GPR101Q96P66 508 aaPredicted RBP15.05■□□□□ -0
PRPF40B-212ENST00000551111 WBP1LQ9NX94 342 aa15.05■□□□□ -0
PRPF40B-212ENST00000551111 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ -0
PRPF40B-212ENST00000551111 SPEF2Q9C093 1822 aa15.04■□□□□ -0
PRPF40B-212ENST00000551111 WDR33Q9C0J8 1336 aaKnown RBP15.04■□□□□ -0
PRPF40B-212ENST00000551111 HOXB7P09629 217 aa15.04■□□□□ -0
PRPF40B-212ENST00000551111 DLK2Q6UY11 383 aa15.04■□□□□ -0
PRPF40B-212ENST00000551111 USP50Q70EL3 339 aaPredicted RBP15.04■□□□□ -0
PRPF40B-212ENST00000551111 C8orf58Q8NAV2 365 aa15.04■□□□□ -0
PRPF40B-212ENST00000551111 KCNQ5Q9NR82 932 aa15.04■□□□□ -0
PRPF40B-212ENST00000551111 SF3B3Q15393 1217 aaKnown RBP15.03■□□□□ -0
PRPF40B-212ENST00000551111 CIAPIN1Q6FI81 312 aa15.03■□□□□ -0
PRPF40B-212ENST00000551111 TRPM4Q8TD43 1214 aa15.03■□□□□ -0
PRPF40B-212ENST00000551111 TMX4Q9H1E5 349 aaPredicted RBP15.03■□□□□ -0
PRPF40B-212ENST00000551111 VPS33BQ9H267 617 aa15.03■□□□□ -0
PRPF40B-212ENST00000551111 POLLQ9UGP5 575 aa15.03■□□□□ -0
PRPF40B-212ENST00000551111 ABT1Q9ULW3 272 aaKnown RBP15.03■□□□□ -0
PRPF40B-212ENST00000551111 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
PRPF40B-212ENST00000551111 RIMBP2O15034 1052 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 LBX1P52954 281 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 GPSM2P81274 684 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 CYP4F22Q6NT55 531 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 TSPYL6Q8N831 410 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 SUPT20HQ8NEM7 779 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 GLIS2Q9BZE0 524 aaPredicted RBP15.02■□□□□ -0
PRPF40B-212ENST00000551111 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 ADARB2Q9NS39 739 aaKnown RBP15.02■□□□□ -0
PRPF40B-212ENST00000551111 HYPKQ9NX55 129 aa15.02■□□□□ -0
PRPF40B-212ENST00000551111 THSD7BQ9C0I4 1608 aa15.02□□□□□ -0.01
PRPF40B-212ENST00000551111 MYH3P11055 1940 aa15.02□□□□□ -0.01
PRPF40B-212ENST00000551111 IRS4O14654 1257 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 EGFRP00533 1210 aa15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 GRM1Q13255 1194 aa15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 NSFL1CQ9UNZ2 370 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 CASP8AP2Q9UKL3 1982 aa15.01□□□□□ -0.01
PRPF40B-212ENST00000551111 PSMD14O00487 310 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 DOK7Q18PE1 504 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 RIC3Q7Z5B4 369 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 CAPNS2Q96L46 248 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 MYD88Q99836 296 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 IFT57Q9NWB7 429 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 PGAP2Q9UHJ9 254 aa15□□□□□ -0.01
PRPF40B-212ENST00000551111 CNOT7Q9UIV1 285 aaKnown RBP15□□□□□ -0.01
PRPF40B-212ENST00000551111 PSME4Q14997 1843 aa14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 AOC2O75106 756 aa14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 HSPA8P11142 646 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 CTCFP49711 727 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 WASHC4Q2M389 1173 aa14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 SAMD7Q7Z3H4 446 aa14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 CCDC85AQ96PX6 553 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 PRDM10Q9NQV6 1147 aa14.99□□□□□ -0.01
PRPF40B-212ENST00000551111 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 C6orf229H3BNL8 230 aa14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 CELF2O95319 508 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 RPS8P62241 208 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 PAXIP1Q6ZW49 1069 aaPredicted RBP14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 AIDAQ96BJ3 306 aa14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 TLL2Q9Y6L7 1015 aa14.98□□□□□ -0.01
PRPF40B-212ENST00000551111 GNAI1P63096 354 aa14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 TNIP1Q15025 636 aa14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 TMC4Q7Z404 712 aa14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 ZBTB38Q8NAP3 1195 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 TBC1D16Q8TBP0 767 aa14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 TSR2Q969E8 191 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
PRPF40B-212ENST00000551111 ZNF646O15015 1829 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms