RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 HPS1Q92902 700 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 NLRP2Q9NX02 1062 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 GPC6Q9Y625 555 aaPredicted RBP8.12□□□□□ -1.11
CPSF6-206ENST00000550987 SPINT1O43278 529 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
CPSF6-206ENST00000550987 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-206ENST00000550987 ARSDP51689 593 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
CPSF6-206ENST00000550987 TOR4AQ9NXH8 423 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 AK5Q9Y6K8 562 aa8.11□□□□□ -1.11
CPSF6-206ENST00000550987 SPATA31C2B4DYI2 1134 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 C6orf118Q5T5N4 469 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
CPSF6-206ENST00000550987 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 LYSMD3Q7Z3D4 306 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 CCSER2Q9H7U1 834 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 PLA2G2EQ9NZK7 142 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
CPSF6-206ENST00000550987 A0A0G2JS52 829 aa8.09□□□□□ -1.11
CPSF6-206ENST00000550987 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.09□□□□□ -1.11
CPSF6-206ENST00000550987 IER5Q5VY09 327 aa8.09□□□□□ -1.11
CPSF6-206ENST00000550987 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
CPSF6-206ENST00000550987 RTCBQ9Y3I0 505 aaKnown RBP8.09□□□□□ -1.11
CPSF6-206ENST00000550987 EPB42P16452 691 aa8.08□□□□□ -1.12
CPSF6-206ENST00000550987 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
CPSF6-206ENST00000550987 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
CPSF6-206ENST00000550987 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
CPSF6-206ENST00000550987 KIAA0586Q9BVV6 1533 aa8.08□□□□□ -1.12
CPSF6-206ENST00000550987 GIPC1O14908 333 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 PHACTR2O75167 634 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 FANCCQ00597 558 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 GNL2Q13823 731 aaKnown RBP8.07□□□□□ -1.12
CPSF6-206ENST00000550987 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
CPSF6-206ENST00000550987 CCDC74AQ96AQ1 378 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 CFHR5Q9BXR6 569 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 CAPN10Q9HC96 672 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 DMGDHQ9UI17 866 aaKnown RBP8.07□□□□□ -1.12
CPSF6-206ENST00000550987 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
CPSF6-206ENST00000550987 A0A1B0GTH6 734 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 RHOQP17081 205 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 MSX1P28360 303 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 INPP5BP32019 993 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 SCARF1Q14162 830 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 XKR5Q6UX68 686 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 METTL16Q86W50 562 aaKnown RBP8.06□□□□□ -1.12
CPSF6-206ENST00000550987 PGBD3Q8N328 593 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 SNX29Q8TEQ0 813 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 TGIF2Q9GZN2 237 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 ZFYVE28Q9HCC9 887 aa8.06□□□□□ -1.12
CPSF6-206ENST00000550987 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-206ENST00000550987 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
CPSF6-206ENST00000550987 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 FIGNL2A6NMB9 653 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 USPL1Q5W0Q7 1092 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
CPSF6-206ENST00000550987 UBXN4Q92575 508 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
CPSF6-206ENST00000550987 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-206ENST00000550987 TDRD9Q8NDG6 1382 aaKnown RBP8.05□□□□□ -1.12
CPSF6-206ENST00000550987 PRDM2Q13029 1718 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 TTLL8A6PVC2 850 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 GADD45BO75293 160 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-206ENST00000550987 PRR20EP86478 221 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 PRR20CP86479 221 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 PRR20DP86480 221 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 PRR20BP86481 221 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 PRR20AP86496 221 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 TTC39BQ5VTQ0 682 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-206ENST00000550987 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
CPSF6-206ENST00000550987 KLRG1Q96E93 195 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 TANGO6Q9C0B7 1094 aa8.04□□□□□ -1.12
CPSF6-206ENST00000550987 XYLBO75191 536 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 ATP4AP20648 1035 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 C1QTNF8P60827 252 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 MMRN1Q13201 1228 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 PMEPA1Q969W9 287 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 GPAMQ9HCL2 828 aa8.03□□□□□ -1.12
CPSF6-206ENST00000550987 PLB1Q6P1J6 1458 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.13
CPSF6-206ENST00000550987 IRS1P35568 1242 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 HS2ST1Q7LGA3 356 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 GAS2L1Q99501 681 aaPredicted RBP8.02□□□□□ -1.13
CPSF6-206ENST00000550987 ACBD3Q9H3P7 528 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 GGT7Q9UJ14 662 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms