RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TRMT112Q9UI30 125 aaKnown RBP21.59■■□□□ 1.05
SSH1-208ENST00000548522 TLL2Q9Y6L7 1015 aa21.59■■□□□ 1.05
SSH1-208ENST00000548522 YDJCA8MPS7 323 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 AOC2O75106 756 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 BBOX1O75936 387 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 TCIRG1Q13488 830 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 MPNDQ8N594 471 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 SUPT20HQ8NEM7 779 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 TRPM4Q8TD43 1214 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 GPR101Q96P66 508 aaPredicted RBP21.58■■□□□ 1.05
SSH1-208ENST00000548522 BABAM1Q9NWV8 329 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 CHPF2Q9P2E5 772 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 TSKSQ9UJT2 592 aa21.58■■□□□ 1.05
SSH1-208ENST00000548522 SH3TC1Q8TE82 1336 aa21.57■■□□□ 1.04
SSH1-208ENST00000548522 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
SSH1-208ENST00000548522 GRAPQ13588 217 aa21.57■■□□□ 1.04
SSH1-208ENST00000548522 HSP90AB3PQ58FF7 597 aa21.57■■□□□ 1.04
SSH1-208ENST00000548522 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
SSH1-208ENST00000548522 GRAPLQ8TC17 118 aaPredicted RBP21.57■■□□□ 1.04
SSH1-208ENST00000548522 VPS33BQ9H267 617 aa21.57■■□□□ 1.04
SSH1-208ENST00000548522 TAF1P21675 1872 aa21.56■■□□□ 1.04
SSH1-208ENST00000548522 CELF2O95319 508 aaKnown RBP21.56■■□□□ 1.04
SSH1-208ENST00000548522 LMOD3Q0VAK6 560 aa21.56■■□□□ 1.04
SSH1-208ENST00000548522 DDX46Q7L014 1031 aaKnown RBP21.56■■□□□ 1.04
SSH1-208ENST00000548522 ABHD8Q96I13 439 aa21.56■■□□□ 1.04
SSH1-208ENST00000548522 LRRC37AA6NMS7 1700 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 CHL1O00533 1208 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 ECE1P42892 770 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 SAPCD2Q86UD0 394 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 LAS1LQ9Y4W2 734 aaKnown RBP21.55■■□□□ 1.04
SSH1-208ENST00000548522 TRPM7Q96QT4 1865 aa21.55■■□□□ 1.04
SSH1-208ENST00000548522 DDX60Q8IY21 1712 aaKnown RBP21.55■■□□□ 1.04
SSH1-208ENST00000548522 DLK2Q6UY11 383 aa21.54■■□□□ 1.04
SSH1-208ENST00000548522 BCL2L13Q9BXK5 485 aa21.54■■□□□ 1.04
SSH1-208ENST00000548522 RALBP1Q15311 655 aa21.53■■□□□ 1.04
SSH1-208ENST00000548522 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
SSH1-208ENST00000548522 ZNF408Q9H9D4 720 aa21.53■■□□□ 1.04
SSH1-208ENST00000548522 ZBTB12Q9Y330 459 aaPredicted RBP21.53■■□□□ 1.04
SSH1-208ENST00000548522 CDHR2Q9BYE9 1310 aa21.53■■□□□ 1.04
SSH1-208ENST00000548522 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
SSH1-208ENST00000548522 HDGFL1Q5TGJ6 251 aa21.52■■□□□ 1.04
SSH1-208ENST00000548522 FAM89AQ96GI7 184 aa21.52■■□□□ 1.04
SSH1-208ENST00000548522 PGAP2Q9UHJ9 254 aa21.52■■□□□ 1.04
SSH1-208ENST00000548522 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
SSH1-208ENST00000548522 MICALL2Q8IY33 904 aa21.51■■□□□ 1.03
SSH1-208ENST00000548522 EGFRP00533 1210 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 TNIP1Q15025 636 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 PLBD2Q8NHP8 589 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 BEGAINQ9BUH8 593 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 DBNDD1Q9H9R9 158 aa21.5■■□□□ 1.03
SSH1-208ENST00000548522 CNOT7Q9UIV1 285 aaKnown RBP21.5■■□□□ 1.03
SSH1-208ENST00000548522 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
SSH1-208ENST00000548522 PSMD14O00487 310 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 GPSM2P81274 684 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 ANKRD13DQ6ZTN6 518 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 SAMD7Q7Z3H4 446 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
SSH1-208ENST00000548522 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 POLLQ9UGP5 575 aa21.48■■□□□ 1.03
SSH1-208ENST00000548522 NSFL1CQ9UNZ2 370 aaKnown RBP21.48■■□□□ 1.03
SSH1-208ENST00000548522 MAP2K2P36507 400 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 FAM161AQ3B820 660 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 TMC4Q7Z404 712 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 USP48Q86UV5 1035 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 RUNDC1Q96C34 613 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 ZIC5Q96T25 663 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 RTL9Q8NET4 1388 aa21.47■■□□□ 1.03
SSH1-208ENST00000548522 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
SSH1-208ENST00000548522 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
SSH1-208ENST00000548522 TBC1D10BQ4KMP7 808 aaPredicted RBP21.46■■□□□ 1.03
SSH1-208ENST00000548522 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
SSH1-208ENST00000548522 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
SSH1-208ENST00000548522 DOK7Q18PE1 504 aa21.45■■□□□ 1.02
SSH1-208ENST00000548522 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
SSH1-208ENST00000548522 HHIPL1Q96JK4 782 aa21.45■■□□□ 1.02
SSH1-208ENST00000548522 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
SSH1-208ENST00000548522 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.02
SSH1-208ENST00000548522 C6orf229H3BNL8 230 aa21.44■■□□□ 1.02
SSH1-208ENST00000548522 H7C1D1 291 aa21.44■■□□□ 1.02
SSH1-208ENST00000548522 ECE2O60344 883 aa21.44■■□□□ 1.02
SSH1-208ENST00000548522 HOXB7P09629 217 aa21.44■■□□□ 1.02
SSH1-208ENST00000548522 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
SSH1-208ENST00000548522 CCDC85CA6NKD9 419 aa21.43■■□□□ 1.02
SSH1-208ENST00000548522 ADM5C9JUS6 153 aa21.43■■□□□ 1.02
SSH1-208ENST00000548522 IRS4O14654 1257 aaPredicted RBP21.43■■□□□ 1.02
SSH1-208ENST00000548522 BRPF1P55201 1214 aaPredicted RBP21.43■■□□□ 1.02
SSH1-208ENST00000548522 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
SSH1-208ENST00000548522 HUNKP57058 714 aa21.42■■□□□ 1.02
SSH1-208ENST00000548522 TBC1D16Q8TBP0 767 aa21.42■■□□□ 1.02
SSH1-208ENST00000548522 DPF2Q92785 391 aa21.42■■□□□ 1.02
SSH1-208ENST00000548522 SEC31BQ9NQW1 1179 aa21.42■■□□□ 1.02
SSH1-208ENST00000548522 ASTN2O75129 1339 aaPredicted RBP21.41■■□□□ 1.02
SSH1-208ENST00000548522 RBM26Q5T8P6 1007 aaKnown RBP21.41■■□□□ 1.02
SSH1-208ENST00000548522 KRT26Q7Z3Y9 468 aa21.41■■□□□ 1.02
SSH1-208ENST00000548522 CFAP44Q96MT7 982 aa21.41■■□□□ 1.02
SSH1-208ENST00000548522 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms